RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 RANGRFQ9HD47 186 aaPredicted RBP10.45□□□□□ -0.74
SNX3-204ENST00000426155 PEF1Q9UBV8 284 aaKnown RBP10.45□□□□□ -0.74
SNX3-204ENST00000426155 COL7A1Q02388 2944 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 IGLC7A0M8Q6 106 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 DBX1A6NMT0 343 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 NDUFB8O95169 186 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 CTRB1P17538 263 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 TBPP20226 339 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 PSMB6P28072 239 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 TNFSF8P32971 234 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 ETV6P41212 452 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 C15orf32Q32M92 178 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 DEFB121Q5J5C9 76 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 CTRB2Q6GPI1 263 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 STEAP1BQ6NZ63 245 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 LPCAT3Q6P1A2 487 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 ACSM6Q6P461 480 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 USMG5Q96IX5 58 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 FANCD2OSQ96PS1 177 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 AIFM2Q9BRQ8 373 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 ZNF257Q9Y2Q1 563 aa10.44□□□□□ -0.74
SNX3-204ENST00000426155 TEX50A0A1B0GTY4 177 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 FAM223BA6NKX1 122 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 PPP5D1E7EU14 171 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 BMPR1BO00238 502 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 CRYGCP07315 174 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 PIGPP57054 158 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 SYNJ2BPP57105 145 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 MRPS10P82664 201 aaKnown RBP10.43□□□□□ -0.74
SNX3-204ENST00000426155 IFITM3Q01628 133 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 ATP5G2Q06055 141 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 SLC25A42Q86VD7 318 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 FAM223AQ8IWN6 122 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 NECAP1Q8NC96 275 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 OR4C16Q8NGL9 310 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 OR13C8Q8NGS7 320 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 MARCH1Q8TCQ1 289 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 TP53RKQ96S44 253 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 QTRT1Q9BXR0 403 aaKnown RBP10.43□□□□□ -0.74
SNX3-204ENST00000426155 COMMD5Q9GZQ3 224 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 FBXL7Q9UJT9 491 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 DMRT1Q9Y5R6 373 aa10.43□□□□□ -0.74
SNX3-204ENST00000426155 SORL1Q92673 2214 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 IGLV11-55A0A075B6I3 123 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 RGS13O14921 159 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 CTDSPLO15194 276 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 LY86O95711 162 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 HLA-AP01891 365 aaKnown RBP10.42□□□□□ -0.74
SNX3-204ENST00000426155 ZP3P21754 424 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 WT1-ASQ06250 92 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 IZUMO4Q1ZYL8 232 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 SEC22AQ96IW7 307 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 CCDC140Q96MF4 163 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 HINT2Q9BX68 163 aa10.42□□□□□ -0.74
SNX3-204ENST00000426155 FABP12A6NFH5 140 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 MFSD2BA6NFX1 497 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 CCNKO75909 580 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 TRAPPC2P0DI81 140 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 TRAPPC2BP0DI82 140 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 SPNP16150 400 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 S100GP29377 79 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 RND3P61587 244 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 SSBP1Q04837 148 aaKnown RBP10.41□□□□□ -0.74
SNX3-204ENST00000426155 KLF5Q13887 457 aaPredicted RBP10.41□□□□□ -0.74
SNX3-204ENST00000426155 RPEL1Q2QD12 228 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 SP6Q3SY56 376 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 THOC7Q6I9Y2 204 aaKnown RBP10.41□□□□□ -0.74
SNX3-204ENST00000426155 ZNF429Q86V71 674 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 TERB2Q8NHR7 220 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 ZNF486Q96H40 463 aaPredicted RBP10.41□□□□□ -0.74
SNX3-204ENST00000426155 SOSTQ9BQB4 213 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 ZNF256Q9Y2P7 627 aaPredicted RBP10.41□□□□□ -0.74
SNX3-204ENST00000426155 OR51B2Q9Y5P1 312 aa10.41□□□□□ -0.74
SNX3-204ENST00000426155 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.4□□□□□ -0.74
SNX3-204ENST00000426155 C15orf61A6NNL5 157 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 H0Y980 276 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 GSTZ1O43708 216 aaPredicted RBP10.4□□□□□ -0.74
SNX3-204ENST00000426155 AKAIN1P0CW23 69 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 OR13C7P0DN81 318 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 DEFA4P12838 97 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 EDN2P20800 178 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 INSL3P51460 131 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 MEF2DQ14814 521 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 IL34Q6ZMJ4 242 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 OR9G4Q8NGQ1 327 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 OR1L8Q8NGR8 309 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 TRIM63Q969Q1 353 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 OR4C12Q96R67 309 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 ZC4H2Q9NQZ6 224 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 NDUFA4L2Q9NRX3 87 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 V9GYH0 126 aa10.4□□□□□ -0.74
SNX3-204ENST00000426155 C3orf85A0A1B0GTC6 90 aa10.39□□□□□ -0.75
SNX3-204ENST00000426155 ANKRD20A5PA0PJZ0 165 aa10.39□□□□□ -0.75
SNX3-204ENST00000426155 SNAPC5O75971 98 aa10.39□□□□□ -0.75
SNX3-204ENST00000426155 DHFRP00374 187 aa10.39□□□□□ -0.75
SNX3-204ENST00000426155 IGKV1-5P01602 117 aa10.39□□□□□ -0.75
SNX3-204ENST00000426155 SERPINE2P07093 398 aa10.39□□□□□ -0.75
SNX3-204ENST00000426155 CTSDP07339 412 aaPredicted RBP10.39□□□□□ -0.75
SNX3-204ENST00000426155 FGF2P09038 288 aa10.39□□□□□ -0.75
SNX3-204ENST00000426155 PTBP1P26599 531 aaKnown RBP eCLIP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms