RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 JTBO76095 146 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 RLN1P04808 185 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 F2RP25116 425 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 GNRHRP30968 328 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 ELLP55199 621 aaPredicted RBP8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 TAS2R20P59543 309 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 PLET1Q6UQ28 207 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 UNQ9165/PRO28630Q6UXU0 137 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 CMTM1Q8IZ96 169 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 SAMD12Q8N8I0 201 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 OR5H2Q8NGV7 314 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 VN1R17PQ8TDU5 208 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 TMEM190Q8WZ59 177 aa8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 LSM10Q969L4 123 aaKnown RBP8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 ZNF2Q9BSG1 426 aaPredicted RBP8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 GAR1Q9NY12 217 aaKnown RBP8.67□□□□□ -1.02
SQSTM1-203ENST00000422245 TGOLN2O43493 480 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 TRAPPC2P0DI81 140 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 TRAPPC2BP0DI82 140 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 C8orf88P0DMB2 117 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 OR13C7P0DN81 318 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 TM4SF20Q53R12 229 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 DHRS11Q6UWP2 260 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 RBPMS2Q6ZRY4 209 aaKnown RBP8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 CADM3Q8N126 398 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 OR1L6Q8NGR2 347 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 OR1L8Q8NGR8 309 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 BSCL2Q96G97 398 aaPredicted RBP8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 ATP6V0BQ99437 205 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 GGTLC1Q9BX51 225 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 ZNF436Q9C0F3 470 aaPredicted RBP8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 FXYD6Q9H0Q3 95 aa8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 MRPL27Q9P0M9 148 aaKnown RBP8.66□□□□□ -1.02
SQSTM1-203ENST00000422245 GPR31O00270 319 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 PGLYRP1O75594 196 aaPredicted RBP8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 SCAF4O95104 1147 aaKnown RBP8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 SERPINE2P07093 398 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 RPA2P15927 270 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 NAT1P18440 290 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 PRSS3P35030 304 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 TGFBR1P36897 503 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 RFX2P48378 723 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 WT1-ASQ06250 92 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 ZNF585BQ52M93 769 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 SPSB3Q6PJ21 355 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 TSPAN14Q8NG11 270 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 OR10W1Q8NGF6 305 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 DGCR14Q96DF8 476 aaKnown RBP8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 SPAG8Q99932 426 aaPredicted RBP8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 C5orf66Q9H5L9 145 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 DAZ1Q9NQZ3 744 aaKnown RBP8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 NDUFA4L2Q9NRX3 87 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 PRNDQ9UKY0 176 aa8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 F11RQ9Y624 299 aaKnown RBP8.65□□□□□ -1.02
SQSTM1-203ENST00000422245 DNAH1Q9P2D7 4330 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 LOC102724200A0A096LPH7 203 aaPredicted RBP8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 IGHV3-35A0A0C4DH35 117 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 TEX50A0A1B0GTY4 177 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 OR2T8A6NH00 312 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 SNAPC5O75971 98 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 PMP2P02689 132 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 S100GP29377 79 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 RPS19P39019 145 aaKnown RBP8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 SLC38A6Q8IZM9 456 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 OR6F1Q8NGZ6 308 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 OR5B3Q8NH48 314 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 FCAMRQ8WWV6 532 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 YIPF6Q96EC8 236 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 TSC22D3Q99576 134 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 HINT2Q9BX68 163 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 C21orf62Q9NYP8 219 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 OR51B2Q9Y5P1 312 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 SELENOKQ9Y6D0 94 aa8.64□□□□□ -1.03
SQSTM1-203ENST00000422245 EPPK1P58107 5090 aaKnown RBP8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 A0A087WXM4 84 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 NDUFA4O00483 81 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 TSPAN4O14817 238 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 TNFAIP8O95379 198 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 KRASP01116 189 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 HRH1P35367 487 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 G6PCP35575 357 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 LPAR6P43657 344 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 LSM3P62310 102 aaKnown RBP8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 SLC25A24Q6NUK1 477 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 OR2C3Q8N628 320 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 SLC25A46Q96AG3 418 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 TMEM56Q96MV1 263 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 SCPEP1Q9HB40 452 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 FAM212BQ9NTI7 297 aaPredicted RBP8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 FKBP11Q9NYL4 201 aa8.63□□□□□ -1.03
SQSTM1-203ENST00000422245 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
SQSTM1-203ENST00000422245 C15orf61A6NNL5 157 aa8.62□□□□□ -1.03
SQSTM1-203ENST00000422245 EIF4EP06730 217 aaKnown RBP8.62□□□□□ -1.03
SQSTM1-203ENST00000422245 HLA-DMAP28067 261 aa8.62□□□□□ -1.03
SQSTM1-203ENST00000422245 MFAP2P55001 183 aa8.62□□□□□ -1.03
SQSTM1-203ENST00000422245 APOC4P55056 127 aa8.62□□□□□ -1.03
SQSTM1-203ENST00000422245 LAMTOR1Q6IAA8 161 aa8.62□□□□□ -1.03
SQSTM1-203ENST00000422245 LPCAT3Q6P1A2 487 aa8.62□□□□□ -1.03
SQSTM1-203ENST00000422245 OR1P1Q8NH06 330 aa8.62□□□□□ -1.03
SQSTM1-203ENST00000422245 GPX8Q8TED1 209 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms