RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 KPRPQ5T749 579 aaPredicted RBP12.77□□□□□ -0.37
SEC22C-206ENST00000420163 CTRB2Q6GPI1 263 aa12.77□□□□□ -0.37
SEC22C-206ENST00000420163 GLYATL2Q8WU03 294 aa12.77□□□□□ -0.37
SEC22C-206ENST00000420163 RCC1LQ96I51 464 aaKnown RBP12.77□□□□□ -0.37
SEC22C-206ENST00000420163 FANCD2OSQ96PS1 177 aa12.77□□□□□ -0.37
SEC22C-206ENST00000420163 HINT2Q9BX68 163 aa12.77□□□□□ -0.37
SEC22C-206ENST00000420163 QTRT1Q9BXR0 403 aaKnown RBP12.77□□□□□ -0.37
SEC22C-206ENST00000420163 TMEM222Q9H0R3 208 aa12.77□□□□□ -0.37
SEC22C-206ENST00000420163 NDUFA4L2Q9NRX3 87 aa12.77□□□□□ -0.37
SEC22C-206ENST00000420163 TMEM14BQ9NUH8 114 aa12.77□□□□□ -0.37
SEC22C-206ENST00000420163 PRR13Q9NZ81 148 aa12.77□□□□□ -0.37
SEC22C-206ENST00000420163 OR51B2Q9Y5P1 312 aa12.77□□□□□ -0.37
SEC22C-206ENST00000420163 A0A0G2JLM5 398 aa12.76□□□□□ -0.37
SEC22C-206ENST00000420163 TRBV12-3P01733 135 aa12.76□□□□□ -0.37
SEC22C-206ENST00000420163 IL7P13232 177 aa12.76□□□□□ -0.37
SEC22C-206ENST00000420163 WT1-ASQ06250 92 aa12.76□□□□□ -0.37
SEC22C-206ENST00000420163 TRIQKQ629K1 86 aa12.76□□□□□ -0.37
SEC22C-206ENST00000420163 SLC25A42Q86VD7 318 aa12.76□□□□□ -0.37
SEC22C-206ENST00000420163 OR1L8Q8NGR8 309 aa12.76□□□□□ -0.37
SEC22C-206ENST00000420163 DPF1Q92782 380 aa12.76□□□□□ -0.37
SEC22C-206ENST00000420163 PRNDQ9UKY0 176 aa12.76□□□□□ -0.37
SEC22C-206ENST00000420163 LINC00854A0A1B0GVQ3 168 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 LINC01619G3V211 115 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 PRB2P02812 416 aaPredicted RBP12.75□□□□□ -0.37
SEC22C-206ENST00000420163 OR8U8P0C7N1 319 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 TRAPPC2P0DI81 140 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 TRAPPC2BP0DI82 140 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 AKR1C4P17516 323 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 AKR1C2P52895 323 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 SUPT4H1P63272 117 aaKnown RBP12.75□□□□□ -0.37
SEC22C-206ENST00000420163 ZNF343Q6P1L6 599 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 DEDD2Q8WXF8 326 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 DCUN1D4Q92564 292 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 TSC22D3Q99576 134 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 DMRT1Q9Y5R6 373 aa12.75□□□□□ -0.37
SEC22C-206ENST00000420163 FAM223BA6NKX1 122 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 B3GALNT1O75752 331 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 NDUFB8O95169 186 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 CDS2O95674 445 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 HSPB1P04792 205 aaKnown RBP12.74□□□□□ -0.37
SEC22C-206ENST00000420163 INPP1P49441 399 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 CCR6P51684 374 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 EXOSC2Q13868 293 aaKnown RBP12.74□□□□□ -0.37
SEC22C-206ENST00000420163 KLK9Q2XQG4 91 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 FAM223AQ8IWN6 122 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 SELENOHQ8IZQ5 122 aaKnown RBP12.74□□□□□ -0.37
SEC22C-206ENST00000420163 NECAP1Q8NC96 275 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 OR5B3Q8NH48 314 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 OR4A16Q8NH70 328 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 DLX4Q92988 240 aaPredicted RBP12.74□□□□□ -0.37
SEC22C-206ENST00000420163 USMG5Q96IX5 58 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 SCGB3A2Q96PL1 93 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 SRSF8Q9BRL6 282 aaKnown RBP12.74□□□□□ -0.37
SEC22C-206ENST00000420163 FBXL7Q9UJT9 491 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 KLK9Q9UKQ9 250 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 S4R3C0 116 aa12.74□□□□□ -0.37
SEC22C-206ENST00000420163 IGLV11-55A0A075B6I3 123 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 A0A0B4J293 547 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 OR13C7P0DN81 318 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 HOXD3P31249 432 aaPredicted RBP12.73□□□□□ -0.37
SEC22C-206ENST00000420163 BTCP35070 178 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 MFAP2P55001 183 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 ATP5G2Q06055 141 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 TMEM187Q14656 261 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 C15orf32Q32M92 178 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 SPINK9Q5DT21 86 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 TMEM268Q5VZI3 342 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 THOC7Q6I9Y2 204 aaKnown RBP12.73□□□□□ -0.37
SEC22C-206ENST00000420163 Q6ZRM9 215 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 TMED4Q7Z7H5 227 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 LSM10Q969L4 123 aaKnown RBP12.73□□□□□ -0.37
SEC22C-206ENST00000420163 GALNT14Q96FL9 552 aa12.73□□□□□ -0.37
SEC22C-206ENST00000420163 DUS4LO95620 317 aaKnown RBP12.72□□□□□ -0.37
SEC22C-206ENST00000420163 IGHV3-23P01764 117 aa12.72□□□□□ -0.37
SEC22C-206ENST00000420163 DHODHQ02127 395 aa12.72□□□□□ -0.37
SEC22C-206ENST00000420163 RBPMSQ93062 196 aaKnown RBP12.72□□□□□ -0.37
SEC22C-206ENST00000420163 SLC25A21Q9BQT8 299 aaPredicted RBP12.72□□□□□ -0.37
SEC22C-206ENST00000420163 FKBP11Q9NYL4 201 aa12.72□□□□□ -0.37
SEC22C-206ENST00000420163 PTTG2Q9NZH5 202 aa12.72□□□□□ -0.37
SEC22C-206ENST00000420163 SEC14L6B5MCN3 397 aa12.71□□□□□ -0.37
SEC22C-206ENST00000420163 OVOL1O14753 267 aa12.71□□□□□ -0.37
SEC22C-206ENST00000420163 ATG12O94817 140 aa12.71□□□□□ -0.37
SEC22C-206ENST00000420163 DHFRP00374 187 aa12.71□□□□□ -0.37
SEC22C-206ENST00000420163 DEFA4P12838 97 aa12.71□□□□□ -0.37
SEC22C-206ENST00000420163 MECP2P51608 486 aaKnown RBP12.71□□□□□ -0.37
SEC22C-206ENST00000420163 KRTAP10-11P60412 298 aa12.71□□□□□ -0.37
SEC22C-206ENST00000420163 HSPE1P61604 102 aaKnown RBP12.71□□□□□ -0.37
SEC22C-206ENST00000420163 PRCDQ00LT1 54 aa12.71□□□□□ -0.37
SEC22C-206ENST00000420163 RNASE11Q8TAA1 199 aaKnown RBP12.71□□□□□ -0.37
SEC22C-206ENST00000420163 RRNAD1Q96FB5 475 aaKnown RBP12.71□□□□□ -0.37
SEC22C-206ENST00000420163 TMEM56Q96MV1 263 aa12.71□□□□□ -0.37
SEC22C-206ENST00000420163 MCRIP2Q9BUT9 160 aaKnown RBP12.71□□□□□ -0.37
SEC22C-206ENST00000420163 RANGRFQ9HD47 186 aaPredicted RBP12.71□□□□□ -0.37
SEC22C-206ENST00000420163 BATF3Q9NR55 127 aa12.71□□□□□ -0.37
SEC22C-206ENST00000420163 PEF1Q9UBV8 284 aaKnown RBP12.71□□□□□ -0.37
SEC22C-206ENST00000420163 TMEM56-RWDD3S4R434 201 aa12.71□□□□□ -0.37
SEC22C-206ENST00000420163 NAP1L6A6NFF2 107 aa12.7□□□□□ -0.38
SEC22C-206ENST00000420163 MFSD2BA6NFX1 497 aa12.7□□□□□ -0.38
SEC22C-206ENST00000420163 BMPR1BO00238 502 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms