RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 EFNA3P52797 238 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 CEBPGP53567 150 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 FBXW4P57775 412 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TPPP2P59282 170 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 FXYD4P59646 89 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 KRTAP10-5P60370 271 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 PCBD1P61457 104 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 HERV-K104P63124 156 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 CCL20P78556 96 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 MEF2BQ02080 365 aaPredicted RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 PAX5Q02548 391 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 FOXF1Q12946 379 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 ENDOGQ14249 297 aaKnown RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 NSDHLQ15738 373 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 ADIRFQ15847 76 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 ATP6V1FQ16864 119 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TMEM183BQ1AE95 376 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TMEM249Q2WGJ8 235 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 DEFB110Q30KQ9 67 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 COX19Q49B96 90 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 PDZD11Q5EBL8 140 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 NMSQ5H8A3 153 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 ACTL10Q5JWF8 245 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 WDR25Q64LD2 544 aaPredicted RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 TMEM42Q69YG0 159 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 Q6ZSR6 202 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SAXO1Q8IYX7 474 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 PRR22Q8IZ63 422 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SELENOHQ8IZQ5 122 aaKnown RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 ZNF664Q8N3J9 261 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SUMF1Q8NBK3 374 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 OR51G1Q8NGK1 321 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 OR5L1Q8NGL2 311 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 OR2T10Q8NGZ9 312 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 OR4F5Q8NH21 305 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 OR4X1Q8NH49 305 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 CA5BP1Q8WTZ4 195 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 ITLN1Q8WWA0 313 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 LSM10Q969L4 123 aaKnown RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 MRPL53Q96EL3 112 aaKnown RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 ZNF799Q96GE5 643 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 WFIKKN1Q96NZ8 548 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 DEFB118Q96PH6 123 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SIGLEC12Q96PQ1 595 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SPACA5Q96QH8 159 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TP53RKQ96S44 253 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TXN2Q99757 166 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SMIM7Q9BQ49 75 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 C20orf144Q9BQM9 153 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SPXQ9BT56 116 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 MAP1LC3BQ9GZQ8 125 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 PRO1933Q9H354 126 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 SLC7A10Q9NS82 523 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 MED29Q9NX70 200 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 FKBP11Q9NYL4 201 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 ZNF581Q9P0T4 197 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 GNG13Q9P2W3 67 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 NXT1Q9UKK6 140 aaKnown RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 PIGLQ9Y2B2 252 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 GOLT1BQ9Y3E0 138 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 TNRC6BQ9UPQ9 1833 aaKnown RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 AGRNO00468 2067 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 PRRC2BQ5JSZ5 2229 aaKnown RBP2.05□□□□□ -2.08
VPS41-206ENST00000418457 PDE4DIPQ5VU43 2346 aa2.05□□□□□ -2.08
VPS41-206ENST00000418457 IGLV3-12A0A075B6K2 115 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 IGKV1D-8A0A087WSZ0 117 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 TRBV9A0A0B4J1U6 114 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 ZNF816-ZNF321PA0A0X1KG74 233 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 A0A1B0GV50 99 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 A0A1B0GX78 115 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 NKX2-6A6NCS4 301 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 OR6C6A6NF89 314 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 ZFP92A6NM28 416 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 GJE1A6NN92 205 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 CEBPZOSA8MTT3 80 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 C17orf112F2Z3M2 114 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 F5H5K5 113 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 H3BMH7 237 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 CHEK1O14757 476 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 DEGS1O15121 323 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 RER1O15258 196 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 TOX3O15405 576 aaPredicted RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 SYNGR2O43760 224 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 CHST1O43916 411 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 ZNF737O75373 536 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 TNFSF13O75888 250 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 SYNGR4O95473 234 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 KLF8O95600 359 aaPredicted RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 NRASP01111 189 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 KRASP01116 189 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 MT-ND6P03923 174 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 SERPINE2P07093 398 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 ESDP10768 282 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 CCL5P13501 91 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 AREGP15514 252 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 ZNF25P17030 456 aaPredicted RBP2.04□□□□□ -2.08
VPS41-206ENST00000418457 COX5AP20674 150 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 CRYGSP22914 178 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 OMGP23515 440 aa2.04□□□□□ -2.08
VPS41-206ENST00000418457 F2RP25116 425 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms