RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ACOT12Q8WYK0 555 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 TXNDC17Q9BRA2 123 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 WDR61Q9GZS3 305 aaKnown RBP2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 EFCAB1Q9HAE3 211 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 XAGE1AQ9HD64 81 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 CISHQ9NSE2 258 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 RPL26L1Q9UNX3 145 aaKnown RBP2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 TIMM9Q9Y5J7 89 aa2.16□□□□□ -2.06
HMGB3P31-201ENST00000413333 PEG3Q9GZU2 1588 aa2.15□□□□□ -2.06
HMGB3P31-201ENST00000413333 A0A0G2JQZ4 141 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 PQLC2LA1A4F0 135 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 LY6LH3BQJ8 138 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 DEFA4P12838 97 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 RPL28P46779 137 aaKnown RBP2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 ALX1Q15699 326 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 MOGQ16653 247 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 LPCAT3Q6P1A2 487 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 PXT1Q8NFP0 134 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 PRTFDC1Q9NRG1 225 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 GLTPQ9NZD2 209 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 RSL24D1Q9UHA3 163 aaKnown RBP2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 PRELID3BQ9Y3B1 194 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 TIMM22Q9Y584 194 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 V9GYQ6 96 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 KDM5BQ9UGL1 1544 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 PCNX2A6NKB5 2137 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 FHAD1B1AJZ9 1412 aa2.15□□□□□ -2.07
HMGB3P31-201ENST00000413333 MTUS2Q5JR59 1369 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 MAST2Q6P0Q8 1798 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 TRAV38-1A0A0B4J264 116 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 ARRDC5A6NEK1 342 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 H3BRN7 92 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 FAAHO00519 579 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 CNIH1O95406 144 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 CRYZL1O95825 349 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 SERPINA1P01009 418 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 PPBPP02775 128 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 LGALS1P09382 135 aaKnown RBP2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 MSNP26038 577 aaKnown RBP2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 PSMB8P28062 276 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 KRTAP10-1P60331 282 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 TMEM258P61165 79 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 EDDM3AQ14507 147 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 TAF1AQ15573 450 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 C9orf64Q5T6V5 341 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 HACD4Q5VWC8 232 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 TMEM42Q69YG0 159 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 LYZL1Q6UWQ5 148 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 S100A7AQ86SG5 101 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 LYG2Q86SG7 212 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 ZNF676Q8N7Q3 588 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 MRPL30Q8TCC3 161 aaKnown RBP2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 ZCCHC13Q8WW36 166 aaKnown RBP2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 KLF6Q99612 283 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 TTTY12Q9BZ98 90 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 COMMD5Q9GZQ3 224 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 IL36BQ9NZH7 164 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 MRPL27Q9P0M9 148 aaKnown RBP2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 ARL5AQ9Y689 179 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 NCKAP5O14513 1909 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 GREB1Q4ZG55 1949 aa2.14□□□□□ -2.07
HMGB3P31-201ENST00000413333 TRAV7A0A075B6U4 112 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 A0A087WUJ7 227 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 TMSB15BA0A087X1C1 80 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 FAM236DA0A1B0GTK5 79 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 A0A1B0GVG6 124 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 OR4C46A6NHA9 309 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 NOS1APO75052 506 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 TTRP02766 147 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 SERPINA7P05543 415 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 FAM236CP0DP71 79 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 CCL5P13501 91 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 ALDH3A1P30838 453 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 RPS20P60866 119 aaKnown RBP2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 HBA1P69905 142 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 KRR1Q13601 381 aaKnown RBP2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 CDK10Q15131 360 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 DHRS4L2Q6PKH6 230 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 TAC4Q86UU9 113 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 LRRC28Q86X40 367 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 OR6V1Q8N148 313 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 OR8B12Q8NGG6 310 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 NEK7Q8TDX7 302 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 NIPSNAP1Q9BPW8 284 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 CMSS1Q9BQ75 279 aaKnown RBP2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 TRIM4Q9C037 500 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 OR8D2Q9GZM6 311 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 DCSTAMPQ9H295 470 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 CXCL16Q9H2A7 254 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 DOK5Q9P104 306 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 ARL2BPQ9Y2Y0 163 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 COL4A2P08572 1712 aa2.13□□□□□ -2.07
HMGB3P31-201ENST00000413333 CCDC88AQ3V6T2 1871 aa2.12□□□□□ -2.07
HMGB3P31-201ENST00000413333 HECW2Q9P2P5 1572 aa2.12□□□□□ -2.07
HMGB3P31-201ENST00000413333 HAND1O96004 215 aa2.12□□□□□ -2.07
HMGB3P31-201ENST00000413333 PRM2P04554 102 aa2.12□□□□□ -2.07
HMGB3P31-201ENST00000413333 CST2P09228 141 aa2.12□□□□□ -2.07
HMGB3P31-201ENST00000413333 MAGEA12P43365 314 aa2.12□□□□□ -2.07
HMGB3P31-201ENST00000413333 EMP1P54849 157 aa2.12□□□□□ -2.07
HMGB3P31-201ENST00000413333 RUNX1Q01196 453 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms