RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 HIST2H2BDQ6DRA6 164 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 WDR74Q6RFH5 385 aaPredicted RBP4.53□□□□□ -1.68
CLK1-202ENST00000409403 MEX3BQ6ZN04 569 aaKnown RBP4.53□□□□□ -1.68
CLK1-202ENST00000409403 MARCH3Q86UD3 253 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 OR5AS1Q8N127 324 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 Q8N976 141 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 OR10G3Q8NGC4 313 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 PLPPR1Q8TBJ4 325 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 SLC25A40Q8TBP6 338 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 PP6455Q8WZ26 134 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 RPL36ALQ969Q0 106 aaKnown RBP4.53□□□□□ -1.68
CLK1-202ENST00000409403 C10orf35Q96D05 121 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 COX14Q96I36 57 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 HARBI1Q96MB7 349 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 SIGLEC12Q96PQ1 595 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 SIGMAR1Q99720 223 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 TIMM29Q9BSF4 260 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 TMEM204Q9BSN7 226 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 WDR61Q9GZS3 305 aaKnown RBP4.53□□□□□ -1.68
CLK1-202ENST00000409403 TMEM38BQ9NVV0 291 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 PLEK2Q9NYT0 353 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 IL36BQ9NZH7 164 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 SHANK1Q9Y566 2161 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 LY96Q9Y6Y9 160 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 TACC2O95359 2948 aa4.53□□□□□ -1.68
CLK1-202ENST00000409403 DOCK9Q9BZ29 2069 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 TGP01266 2768 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 GRIFINA4D1Z8 144 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 H0Y8G0 127 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 MS4A18H0YCH9 400 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 FCN1O00602 326 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 ADAM20O43506 726 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 TNFP01375 233 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 HLA-DQA1P01909 254 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 SMIM10L1P0DMW3 83 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 CTLA4P16410 223 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 COX5AP20674 150 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 OR1D2P34982 312 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 GPR6P46095 362 aaPredicted RBP4.52□□□□□ -1.69
CLK1-202ENST00000409403 LGALS7P47929 136 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 CAMPP49913 170 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 ASCL1P50553 236 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 GPM6AP51674 278 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 FXYD4P59646 89 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 HTD2P86397 168 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 ZP4Q12836 540 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 SRSF6Q13247 344 aaKnown RBP4.52□□□□□ -1.69
CLK1-202ENST00000409403 ZNF726P1Q15940 193 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 KIF26BQ2KJY2 2108 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 ZNF776Q68DI1 518 aaPredicted RBP4.52□□□□□ -1.69
CLK1-202ENST00000409403 AMMECR1LQ6DCA0 310 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 CPEB2Q7Z5Q1 589 aaKnown RBP4.52□□□□□ -1.69
CLK1-202ENST00000409403 OR4F17Q8NGA8 305 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 OR5D13Q8NGL4 314 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 OR10G8Q8NGN5 311 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 OR1K1Q8NGR3 316 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 SMIM10Q96HG1 83 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 BMFQ96LC9 184 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 UHRF2Q96PU4 802 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 OR2V2Q96R30 315 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 APOOQ9BUR5 198 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 MBNL1Q9NR56 388 aaKnown RBP4.52□□□□□ -1.69
CLK1-202ENST00000409403 CENPMQ9NSP4 180 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 C1RLQ9NZP8 487 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 NXT1Q9UKK6 140 aaKnown RBP4.52□□□□□ -1.69
CLK1-202ENST00000409403 PPIAL4AQ9Y536 164 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 OBSL1O75147 1896 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 NBEAL2Q6ZNJ1 2754 aa4.52□□□□□ -1.69
CLK1-202ENST00000409403 CHD3Q12873 2000 aaKnown RBP4.51□□□□□ -1.69
CLK1-202ENST00000409403 A6NDN8 102 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 B4DGG1 531 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 C11orf94C9JXX5 98 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 NPIPA5E9PKD4 350 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 H0Y980 276 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 CHST1O43916 411 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 LMX1BO60663 402 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 GOSR1O95249 250 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 HAND1O96004 215 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 WNT2P09544 360 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 C3orf79P0CE67 100 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 NPY1RP25929 384 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 GRB2P62993 217 aaKnown RBP4.51□□□□□ -1.69
CLK1-202ENST00000409403 PSG9Q00887 426 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 HIST1H1AQ02539 215 aaPredicted RBP4.51□□□□□ -1.69
CLK1-202ENST00000409403 CLEC12BQ2HXU8 276 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 RPEL1Q2QD12 228 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 TMEM52BQ4KMG9 183 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 NMSQ5H8A3 153 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 PHYHD1Q5SRE7 291 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 BVES-AS1Q5T3Y7 98 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 ZNF324BQ6AW86 544 aaPredicted RBP4.51□□□□□ -1.69
CLK1-202ENST00000409403 SLC25A34Q6PIV7 304 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 ASCL4Q6XD76 172 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 COLCA1Q6ZS62 124 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 Q6ZSV7 163 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 FA2HQ7L5A8 372 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 OR4N5Q8IXE1 308 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 SELENOHQ8IZQ5 122 aaKnown RBP4.51□□□□□ -1.69
CLK1-202ENST00000409403 CMTM8Q8IZV2 173 aa4.51□□□□□ -1.69
CLK1-202ENST00000409403 ZNF525Q8N782 197 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms