RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 OPN3Q9H1Y3 402 aaPredicted RBP16.32■□□□□ 0.2
CCDC47-202ENST00000403162 IFI27L2Q9H2X8 130 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 TMEM106BQ9NUM4 274 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 FZR1Q9UM11 496 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 BSNQ9UPA5 3926 aa16.32■□□□□ 0.2
CCDC47-202ENST00000403162 SPENQ96T58 3664 aaKnown RBP16.32■□□□□ 0.2
CCDC47-202ENST00000403162 CECR9P0C854 216 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 HNF1AP20823 631 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 TPPP2P59282 170 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 ARSJQ5FYB0 599 aaPredicted RBP16.31■□□□□ 0.2
CCDC47-202ENST00000403162 TEPPQ6URK8 271 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 DDB2Q92466 427 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 FAM234AQ9H0X4 552 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 IGKV1D-17A0A075B6S4 117 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 TRGV10A0A0A0MS01 117 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 GRIFINA4D1Z8 144 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 C15orf61A6NNL5 157 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 MGST3O14880 152 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 RAB4AP20338 218 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 RPL29P47914 159 aaKnown RBP16.31■□□□□ 0.2
CCDC47-202ENST00000403162 THBS3P49746 956 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 LINC00310P59036 64 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 LY6DQ14210 128 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 STPG3Q8N7X2 389 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 PLPPR2Q96GM1 343 aa16.31■□□□□ 0.2
CCDC47-202ENST00000403162 SEPSECSQ9HD40 501 aaKnown RBP16.31■□□□□ 0.2
CCDC47-202ENST00000403162 SRRM5B3KS81 715 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 SFTPCP11686 197 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 AREGP15514 252 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 CBLN1P23435 193 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 LGALS4P56470 323 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 HLA-DRB5Q30154 266 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 MRPL52Q86TS9 123 aaKnown RBP16.3■□□□□ 0.2
CCDC47-202ENST00000403162 UHRF2Q96PU4 802 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 TBX15Q96SF7 602 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 MRPL18Q9H0U6 180 aaKnown RBP16.3■□□□□ 0.2
CCDC47-202ENST00000403162 ARL2-SNX15V9GYD0 113 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 SVILO95425 2214 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 A8MXE2 369 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 ZNF134P52741 427 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 SPATA31B1PQ5VZV4 182 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 OR4S2Q8NH73 311 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 PPP1R35Q8TAP8 253 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 DUSP13Q9UII6 198 aa16.3■□□□□ 0.2
CCDC47-202ENST00000403162 ZNF705FA8MVS1 300 aaPredicted RBP16.29■□□□□ 0.2
CCDC47-202ENST00000403162 AHRRA9YTQ3 701 aa16.29■□□□□ 0.2
CCDC47-202ENST00000403162 IGLV1-44P01699 117 aa16.29■□□□□ 0.2
CCDC47-202ENST00000403162 ZNF705DP0CH99 300 aaPredicted RBP16.29■□□□□ 0.2
CCDC47-202ENST00000403162 ZNF705BP0CI00 300 aaPredicted RBP16.29■□□□□ 0.2
CCDC47-202ENST00000403162 CRISP2P16562 243 aa16.29■□□□□ 0.2
CCDC47-202ENST00000403162 NPY1RP25929 384 aa16.29■□□□□ 0.2
CCDC47-202ENST00000403162 TDGF1P3P51864 188 aa16.29■□□□□ 0.2
CCDC47-202ENST00000403162 RAB31Q13636 194 aa16.29■□□□□ 0.2
CCDC47-202ENST00000403162 Q6ZWC4 215 aa16.29■□□□□ 0.2
CCDC47-202ENST00000403162 CNEP1R1Q8N9A8 125 aa16.29■□□□□ 0.2
CCDC47-202ENST00000403162 EAF1Q96JC9 268 aaPredicted RBP16.29■□□□□ 0.2
CCDC47-202ENST00000403162 FOXA2Q9Y261 457 aaPredicted RBP16.29■□□□□ 0.2
CCDC47-202ENST00000403162 ACACBO00763 2458 aa16.29■□□□□ 0.2
CCDC47-202ENST00000403162 SLC17A3O00476 420 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 ITGB1BP1O14713 200 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 KIR2DL2P43627 348 aaPredicted RBP16.28■□□□□ 0.2
CCDC47-202ENST00000403162 RANP62826 216 aaKnown RBP16.28■□□□□ 0.2
CCDC47-202ENST00000403162 TEX43Q6ZNM6 134 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 C1orf174Q8IYL3 243 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 SLC24A4Q8NFF2 622 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 TMEM14BQ9NUH8 114 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 TPRP12270 2363 aaKnown RBP16.28■□□□□ 0.2
CCDC47-202ENST00000403162 TRBV9A0A0B4J1U6 114 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 IGHV2OR16-5A0A0B4J2B6 119 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 FNDC10F2Z333 226 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 PRR20EP86478 221 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 PRR20CP86479 221 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 PRR20DP86480 221 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 PRR20BP86481 221 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 PRR20AP86496 221 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 C20orf144Q9BQM9 153 aa16.28■□□□□ 0.2
CCDC47-202ENST00000403162 SERF1AO75920 110 aa16.27■□□□□ 0.2
CCDC47-202ENST00000403162 CFHR2P36980 270 aa16.27■□□□□ 0.2
CCDC47-202ENST00000403162 RPEL1Q2QD12 228 aa16.27■□□□□ 0.2
CCDC47-202ENST00000403162 TPTE2P1Q5T6R2 138 aa16.27■□□□□ 0.2
CCDC47-202ENST00000403162 OR1L6Q8NGR2 347 aa16.27■□□□□ 0.2
CCDC47-202ENST00000403162 ATG101Q9BSB4 218 aa16.27■□□□□ 0.2
CCDC47-202ENST00000403162 TLN1Q9Y490 2541 aaKnown RBP16.27■□□□□ 0.19
CCDC47-202ENST00000403162 MAP1BP46821 2468 aaKnown RBP16.27■□□□□ 0.19
CCDC47-202ENST00000403162 FOXH1O75593 365 aa16.27■□□□□ 0.19
CCDC47-202ENST00000403162 RAB7AP51149 207 aa16.27■□□□□ 0.19
CCDC47-202ENST00000403162 HSPE1P61604 102 aaKnown RBP16.27■□□□□ 0.19
CCDC47-202ENST00000403162 Q0VG73 95 aa16.27■□□□□ 0.19
CCDC47-202ENST00000403162 VWA1Q6PCB0 445 aa16.27■□□□□ 0.19
CCDC47-202ENST00000403162 GFRALQ6UXV0 394 aa16.27■□□□□ 0.19
CCDC47-202ENST00000403162 SFXN3Q9BWM7 321 aa16.27■□□□□ 0.19
CCDC47-202ENST00000403162 SLC25A10Q9UBX3 287 aaPredicted RBP16.27■□□□□ 0.19
CCDC47-202ENST00000403162 M0QZK8 103 aa16.26■□□□□ 0.19
CCDC47-202ENST00000403162 TNFSF13O75888 250 aa16.26■□□□□ 0.19
CCDC47-202ENST00000403162 TOMM20LQ6UXN7 152 aa16.26■□□□□ 0.19
CCDC47-202ENST00000403162 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.26■□□□□ 0.19
CCDC47-202ENST00000403162 OR2Z1Q8NG97 314 aa16.26■□□□□ 0.19
CCDC47-202ENST00000403162 OR4P4Q8NGL7 312 aa16.26■□□□□ 0.19
CCDC47-202ENST00000403162 CORO2AQ92828 525 aa16.26■□□□□ 0.19
CCDC47-202ENST00000403162 NEUROG1Q92886 237 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms