RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 RRNAD1Q96FB5 475 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-207ENST00000397411 ANKRD34BA5PLL1 514 aa19.64■□□□□ 0.73
TSPAN4-207ENST00000397411 LINC01619G3V211 115 aa19.64■□□□□ 0.73
TSPAN4-207ENST00000397411 UCP1P25874 307 aa19.64■□□□□ 0.73
TSPAN4-207ENST00000397411 MECP2P51608 486 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-207ENST00000397411 DEFA5Q01523 94 aa19.64■□□□□ 0.73
TSPAN4-207ENST00000397411 SRSF8Q9BRL6 282 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-207ENST00000397411 A0A1B0GW64 132 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 CRYM-AS1A6NIL9 109 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 FAM223BA6NKX1 122 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 CENPXA8MT69 81 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 OR2J3O76001 311 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 LINC00299Q6ZSB3 139 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 FAM223AQ8IWN6 122 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 NECAP1Q8NC96 275 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 TMEM56Q96MV1 263 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 SLC25A21Q9BQT8 299 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 GPR61Q9BZJ8 451 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 TMEM222Q9H0R3 208 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 AKIP1Q9NQ31 210 aa19.63■□□□□ 0.73
TSPAN4-207ENST00000397411 NOTCH3Q9UM47 2321 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 NAP1L6A6NFF2 107 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 CGB1A6NKQ9 187 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 C15orf61A6NNL5 157 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 CYB5BO43169 146 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 OR13C7P0DN81 318 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 HIST1H1BP16401 226 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 DEFA6Q01524 100 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 SAMD5Q5TGI4 173 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 HSD17B13Q7Z5P4 300 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 TMED4Q7Z7H5 227 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 OR10W1Q8NGF6 305 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 OR5B3Q8NH48 314 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 RANGRFQ9HD47 186 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 FBXL7Q9UJT9 491 aa19.62■□□□□ 0.73
TSPAN4-207ENST00000397411 IGHV4OR15-8A0A075B7B6 117 aa19.61■□□□□ 0.73
TSPAN4-207ENST00000397411 A0A087WW49 117 aa19.61■□□□□ 0.73
TSPAN4-207ENST00000397411 CRYGCP07315 174 aa19.61■□□□□ 0.73
TSPAN4-207ENST00000397411 ANXA3P12429 323 aa19.61■□□□□ 0.73
TSPAN4-207ENST00000397411 CTRB1P17538 263 aa19.61■□□□□ 0.73
TSPAN4-207ENST00000397411 CTRB2Q6GPI1 263 aa19.61■□□□□ 0.73
TSPAN4-207ENST00000397411 IGLC7A0M8Q6 106 aa19.6■□□□□ 0.73
TSPAN4-207ENST00000397411 IGKV1-5P01602 117 aa19.6■□□□□ 0.73
TSPAN4-207ENST00000397411 FHL3Q13643 280 aa19.6■□□□□ 0.73
TSPAN4-207ENST00000397411 C19orf35Q6ZS72 473 aa19.6■□□□□ 0.73
TSPAN4-207ENST00000397411 GLYATL2Q8WU03 294 aa19.6■□□□□ 0.73
TSPAN4-207ENST00000397411 LSM10Q969L4 123 aaKnown RBP19.6■□□□□ 0.73
TSPAN4-207ENST00000397411 SDHCQ99643 169 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-207ENST00000397411 PDCD10Q9BUL8 212 aa19.6■□□□□ 0.73
TSPAN4-207ENST00000397411 NDUFA4L2Q9NRX3 87 aa19.6■□□□□ 0.73
TSPAN4-207ENST00000397411 TMEM14BQ9NUH8 114 aa19.6■□□□□ 0.73
TSPAN4-207ENST00000397411 TRBV9A0A0B4J1U6 114 aa19.59■□□□□ 0.73
TSPAN4-207ENST00000397411 CDS2O95674 445 aa19.59■□□□□ 0.73
TSPAN4-207ENST00000397411 IL7P13232 177 aa19.59■□□□□ 0.73
TSPAN4-207ENST00000397411 SLURP1P55000 103 aa19.59■□□□□ 0.73
TSPAN4-207ENST00000397411 EXOSC2Q13868 293 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-207ENST00000397411 IZUMO4Q1ZYL8 232 aa19.59■□□□□ 0.73
TSPAN4-207ENST00000397411 TMEM268Q5VZI3 342 aa19.59■□□□□ 0.73
TSPAN4-207ENST00000397411 SELENOHQ8IZQ5 122 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-207ENST00000397411 S100ZQ8WXG8 99 aa19.59■□□□□ 0.73
TSPAN4-207ENST00000397411 PEF1Q9UBV8 284 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-207ENST00000397411 HSPE1P61604 102 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-207ENST00000397411 C15orf32Q32M92 178 aa19.58■□□□□ 0.72
TSPAN4-207ENST00000397411 SLC25A24Q6NUK1 477 aa19.58■□□□□ 0.72
TSPAN4-207ENST00000397411 ZNF343Q6P1L6 599 aa19.58■□□□□ 0.72
TSPAN4-207ENST00000397411 DCUN1D4Q92564 292 aa19.58■□□□□ 0.72
TSPAN4-207ENST00000397411 RBPMSQ93062 196 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-207ENST00000397411 TMEM230Q96A57 120 aa19.58■□□□□ 0.72
TSPAN4-207ENST00000397411 PTTG2Q9NZH5 202 aa19.58■□□□□ 0.72
TSPAN4-207ENST00000397411 THYN1Q9P016 225 aa19.58■□□□□ 0.72
TSPAN4-207ENST00000397411 CMYA5Q8N3K9 4069 aa19.57■□□□□ 0.72
TSPAN4-207ENST00000397411 DBX1A6NMT0 343 aa19.57■□□□□ 0.72
TSPAN4-207ENST00000397411 OVOL1O14753 267 aa19.57■□□□□ 0.72
TSPAN4-207ENST00000397411 IFNA17P01571 189 aa19.57■□□□□ 0.72
TSPAN4-207ENST00000397411 ZP3P21754 424 aa19.57■□□□□ 0.72
TSPAN4-207ENST00000397411 CCR6P51684 374 aa19.57■□□□□ 0.72
TSPAN4-207ENST00000397411 RBMS2Q15434 407 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-207ENST00000397411 BEAN1Q3B7T3 259 aa19.57■□□□□ 0.72
TSPAN4-207ENST00000397411 C7orf50Q9BRJ6 194 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-207ENST00000397411 SEC14L6B5MCN3 397 aa19.56■□□□□ 0.72
TSPAN4-207ENST00000397411 NDUFB8O95169 186 aa19.56■□□□□ 0.72
TSPAN4-207ENST00000397411 WT1-ASQ06250 92 aa19.56■□□□□ 0.72
TSPAN4-207ENST00000397411 FAM219AQ8IW50 185 aa19.56■□□□□ 0.72
TSPAN4-207ENST00000397411 DLX4Q92988 240 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-207ENST00000397411 GALNT14Q96FL9 552 aa19.56■□□□□ 0.72
TSPAN4-207ENST00000397411 FANCD2OSQ96PS1 177 aa19.56■□□□□ 0.72
TSPAN4-207ENST00000397411 VAMP1P23763 118 aa19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 ERHP84090 104 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 TMEM187Q14656 261 aa19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 TATDN3Q17R31 274 aa19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 TMEM128Q5BJH2 165 aa19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 FAM209BQ5JX69 171 aa19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 C9orf66Q5T8R8 295 aa19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 CENPSQ8N2Z9 138 aa19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 LHFPL5Q8TAF8 219 aa19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 EEF1AKMT3Q96AZ1 226 aa19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 PLEKHA3Q9HB20 300 aa19.55■□□□□ 0.72
TSPAN4-207ENST00000397411 A0A0B4J293 547 aa19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 HOXD3P31249 432 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-207ENST00000397411 SRPXP78539 464 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms