RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 RAP1BP61224 184 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 SPA17Q15506 151 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 ZNF876PQ49A33 203 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 ACSM3Q53FZ2 586 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 C10orf128Q5T292 105 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 UFSP1Q6NVU6 142 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 Q6ZRP5 223 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 ZNF826PQ6ZT77 177 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 MRPL55Q7Z7F7 128 aaKnown RBP3.85□□□□□ -1.79
AP3S1-202ENST00000395548 UBE2DNLQ8IWF7 75 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 CBR4Q8N4T8 237 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 NATD1Q8N6N6 113 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 TEX47Q8TBZ9 253 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 MYOZ3Q8TDC0 251 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 LRRC29Q8WV35 223 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 TMEM230Q96A57 120 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 APOBEC3DQ96AK3 386 aaPredicted RBP3.85□□□□□ -1.79
AP3S1-202ENST00000395548 ROPN1LQ96C74 230 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 GPR22Q99680 433 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 PDCD1LG2Q9BQ51 273 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 ADAT1Q9BUB4 502 aaKnown RBP3.85□□□□□ -1.79
AP3S1-202ENST00000395548 RNF126Q9BV68 326 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 TXNIPQ9H3M7 391 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 GNB4Q9HAV0 340 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 C12orf10Q9HB07 376 aa3.85□□□□□ -1.79
AP3S1-202ENST00000395548 FSIP2Q5CZC0 6907 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 EXOC1LA0A1B0GW35 172 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 NCBP2LA6PVI3 153 aaKnown RBP3.84□□□□□ -1.79
AP3S1-202ENST00000395548 FABP7O15540 132 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 CDK1P06493 297 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 DBIP07108 87 aaKnown RBP3.84□□□□□ -1.79
AP3S1-202ENST00000395548 SERPINB5P36952 375 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 GALR1P47211 349 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 ZNF133P52736 654 aaPredicted RBP3.84□□□□□ -1.79
AP3S1-202ENST00000395548 APOC4P55056 127 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 CLDN12P56749 244 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 NUTF2P61970 127 aaKnown RBP3.84□□□□□ -1.79
AP3S1-202ENST00000395548 ESRRGP62508 458 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 ELF3P78545 371 aaPredicted RBP3.84□□□□□ -1.79
AP3S1-202ENST00000395548 HIST3H3Q16695 136 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 C17orf58Q2M2W7 97 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 ZNF678Q5SXM1 525 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 MRPL2Q5T653 305 aaKnown RBP3.84□□□□□ -1.79
AP3S1-202ENST00000395548 LELP1Q5T871 98 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 LCN8Q6JVE9 175 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 FAM53AQ6NSI3 398 aaPredicted RBP3.84□□□□□ -1.79
AP3S1-202ENST00000395548 DNM1P34Q6PK57 102 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 EPGNQ6UW88 154 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 C5orf56Q8N8D9 126 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 CCDC54Q8NEL0 328 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 OR2K2Q8NGT1 345 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 MRGPRDQ8TDS7 321 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 DGCR14Q96DF8 476 aaKnown RBP3.84□□□□□ -1.79
AP3S1-202ENST00000395548 SMIM19Q96E16 107 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 TEX37Q96LM6 180 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 KCTD7Q96MP8 289 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 TMEM56Q96MV1 263 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 GAFA1Q96PS6 74 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 LITAFQ99732 161 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 PARLQ9H300 379 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 EXOSC4Q9NPD3 245 aaKnown RBP3.84□□□□□ -1.79
AP3S1-202ENST00000395548 SLC2A9Q9NRM0 540 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 IMPAD1Q9NX62 359 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 DPM3Q9P2X0 92 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 RPS6KB2Q9UBS0 482 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 HHLA2Q9UM44 414 aa3.84□□□□□ -1.79
AP3S1-202ENST00000395548 LRP1Q07954 4544 aaKnown RBP3.83□□□□□ -1.8
AP3S1-202ENST00000395548 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.83□□□□□ -1.8
AP3S1-202ENST00000395548 A0A0B4J2A0 478 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 KIR2DL5BA0A0G2JN68 375 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 KIR2DL5BA0A0G2JPC4 375 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 A0A0G2JRQ6 117 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 FAM240AA0A1B0GVK7 77 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 C17orf98A8MV24 154 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 FAM220BPB1ANY3 271 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 H0YJX3 145 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 BIRC5O15392 142 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 SMIM24O75264 130 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 SERPINA1P01009 418 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 TCRBP04435 133 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 ISG15P05161 165 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 GKN3PP0CG01 181 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 C8orf88P0DMB2 117 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 ZNF823P16415 610 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 DLX6P56179 175 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 LSM6P62312 80 aaKnown RBP3.83□□□□□ -1.8
AP3S1-202ENST00000395548 SELENOTP62341 195 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 MXD1Q05195 221 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 AESQ08117 197 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 GUK1Q16774 197 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 SMARCD3Q6STE5 483 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 OLIG3Q7RTU3 272 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 HMGN2P46Q86SG4 172 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 C10orf107Q8IVU9 208 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 KIR2DL5AQ8N109 375 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 C6orf223Q8N319 242 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 ZNF680Q8NEM1 530 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 OR51G1Q8NGK1 321 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 OR5J2Q8NH18 312 aa3.83□□□□□ -1.8
AP3S1-202ENST00000395548 KIR2DL5BQ8NHK3 375 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms