RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 MEF2DQ14814 521 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 SPINK9Q5DT21 86 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 CTRB2Q6GPI1 263 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 ZNF343Q6P1L6 599 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 TERB2Q8NHR7 220 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 SEC22AQ96IW7 307 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 USMG5Q96IX5 58 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 FANCD2OSQ96PS1 177 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 AIFM2Q9BRQ8 373 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 RTBDNQ9BSG5 229 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 THAP7Q9BT49 309 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 QTRT1Q9BXR0 403 aaKnown RBP5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 C5orf66Q9H5L9 145 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 RANGRFQ9HD47 186 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 ZC4H2Q9NQZ6 224 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 MCUBQ9NWR8 336 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 COPZ2Q9P299 210 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 PEF1Q9UBV8 284 aaKnown RBP5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 FBXL7Q9UJT9 491 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 OR51B2Q9Y5P1 312 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 SELENOKQ9Y6D0 94 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 NOTCH3Q9UM47 2321 aa5.88□□□□□ -1.47
HMGB3P1-201ENST00000393368 TGP01266 2768 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 IGLV11-55A0A075B6I3 123 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 IGHV3-21A0A0B4J1V1 117 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 A0A0G2JRQ6 117 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 C3orf85A0A1B0GTC6 90 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 FAM223BA6NKX1 122 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 C15orf61A6NNL5 157 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 H0Y980 276 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 ZNF701M0R085 212 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 BMPR1BO00238 502 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 SERPINE2P07093 398 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 CRYGCP07315 174 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 CTSDP07339 412 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 TRAPPC2P0DI81 140 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 TRAPPC2BP0DI82 140 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 OR13C7P0DN81 318 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 DEFA4P12838 97 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 S100A5P33763 92 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 MFAP2P55001 183 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 KLF9Q13886 244 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 TRIM16LQ309B1 348 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 REC114Q7Z4M0 266 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 CCDC190Q86UF4 302 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 SLC25A42Q86VD7 318 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 FAM223AQ8IWN6 122 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 Q8N402 240 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 NECAP1Q8NC96 275 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 TRIM63Q969Q1 353 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 ZNF486Q96H40 463 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 CCDC140Q96MF4 163 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 GPR61Q9BZJ8 451 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 NDUFA4L2Q9NRX3 87 aa5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 C14orf166Q9Y224 244 aaKnown RBP5.87□□□□□ -1.47
HMGB3P1-201ENST00000393368 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 SNAPC5O75971 98 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 LY86O95711 162 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 OR5AC1P0C628 307 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 PTBP1P26599 531 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 MECP2P51608 486 aaKnown RBP5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 AKR1C2P52895 323 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 KLF5Q13887 457 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 RPEL1Q2QD12 228 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 DEFB121Q5J5C9 76 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 ACSM6Q6P461 480 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 CLEC19AQ6UXS0 136 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 H2BFWTQ7Z2G1 175 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 GDPD1Q8N9F7 314 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 CCDC71LQ8N9Z2 235 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 OR6Q1Q8NGQ2 317 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 OR1L8Q8NGR8 309 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 OR4A16Q8NH70 328 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 LHFPL5Q8TAF8 219 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 ZFAND1Q8TCF1 268 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 TMEM230Q96A57 120 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 PRRT1Q99946 306 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 NAA60Q9H7X0 242 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 TMEM14BQ9NUH8 114 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 RABL2AQ9UBK7 228 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 PRNDQ9UKY0 176 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 RABL2BQ9UNT1 228 aa5.86□□□□□ -1.47
HMGB3P1-201ENST00000393368 A0A0B4J293 547 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 IGHV3-35A0A0C4DH35 117 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 TEX13DA0A0J9YY54 714 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 LINC00854A0A1B0GVQ3 168 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 CRYM-AS1A6NIL9 109 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 NXPH3O95157 252 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 OR2C1O95371 312 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 DHFRP00374 187 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 P0C879 139 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 SPNP16150 400 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 ZP3P21754 424 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 UCP1P25874 307 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 GPR183P32249 361 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 ARL3P36405 182 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 C11orf87Q6NUJ2 197 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 SLC25A24Q6NUK1 477 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 IL34Q6ZMJ4 242 aa5.85□□□□□ -1.47
HMGB3P1-201ENST00000393368 ZNF429Q86V71 674 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms