RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 Q8WTZ3 238 aa20.8■□□□□ 0.92
SMARCD3-203ENST00000392811 FLYWCH2Q96CP2 140 aaKnown RBP20.8■□□□□ 0.92
SMARCD3-203ENST00000392811 A0A087X0M5 115 aa20.8■□□□□ 0.92
SMARCD3-203ENST00000392811 A0A1B0GX30 115 aa20.8■□□□□ 0.92
SMARCD3-203ENST00000392811 IGHV1-8P0DP01 117 aa20.8■□□□□ 0.92
SMARCD3-203ENST00000392811 TMEM249Q2WGJ8 235 aa20.8■□□□□ 0.92
SMARCD3-203ENST00000392811 OR5B3Q8NH48 314 aa20.8■□□□□ 0.92
SMARCD3-203ENST00000392811 RPUSD4Q96CM3 377 aaKnown RBP20.8■□□□□ 0.92
SMARCD3-203ENST00000392811 URGCP-MRPS24S4R325 110 aa20.8■□□□□ 0.92
SMARCD3-203ENST00000392811 ZNF672Q499Z4 452 aaPredicted RBP20.79■□□□□ 0.92
SMARCD3-203ENST00000392811 C11orf42Q8N5U0 333 aa20.79■□□□□ 0.92
SMARCD3-203ENST00000392811 OR9G1Q8NH87 305 aa20.79■□□□□ 0.92
SMARCD3-203ENST00000392811 KCNIP2Q9NS61 270 aa20.79■□□□□ 0.92
SMARCD3-203ENST00000392811 NAT8Q9UHE5 227 aa20.79■□□□□ 0.92
SMARCD3-203ENST00000392811 TNCP24821 2201 aa20.79■□□□□ 0.92
SMARCD3-203ENST00000392811 CYP2G1PQ6ZSU1 146 aa20.78■□□□□ 0.92
SMARCD3-203ENST00000392811 NDUFS6O75380 124 aaKnown RBP20.78■□□□□ 0.92
SMARCD3-203ENST00000392811 CXCL1P09341 107 aa20.78■□□□□ 0.92
SMARCD3-203ENST00000392811 RPL35P42766 123 aaKnown RBP20.78■□□□□ 0.92
SMARCD3-203ENST00000392811 AKR1D1P51857 326 aa20.78■□□□□ 0.92
SMARCD3-203ENST00000392811 SNRPEP62304 92 aaKnown RBP20.78■□□□□ 0.92
SMARCD3-203ENST00000392811 PDPNQ86YL7 162 aa20.78■□□□□ 0.92
SMARCD3-203ENST00000392811 PARLQ9H300 379 aa20.78■□□□□ 0.92
SMARCD3-203ENST00000392811 TRBV23-1A0A0A0MS06 115 aa20.77■□□□□ 0.92
SMARCD3-203ENST00000392811 FNDC10F2Z333 226 aa20.77■□□□□ 0.92
SMARCD3-203ENST00000392811 ZNF137PP52743 207 aa20.77■□□□□ 0.92
SMARCD3-203ENST00000392811 B2MP61769 119 aa20.77■□□□□ 0.92
SMARCD3-203ENST00000392811 TMEM241Q24JQ0 296 aa20.77■□□□□ 0.92
SMARCD3-203ENST00000392811 OR10W1Q8NGF6 305 aa20.77■□□□□ 0.92
SMARCD3-203ENST00000392811 OR4C13Q8NGP0 309 aa20.77■□□□□ 0.92
SMARCD3-203ENST00000392811 STPG3Q8N7X2 389 aa20.77■□□□□ 0.91
SMARCD3-203ENST00000392811 NEIL1Q96FI4 390 aaPredicted RBP20.77■□□□□ 0.91
SMARCD3-203ENST00000392811 TMEM242Q9NWH2 141 aa20.77■□□□□ 0.91
SMARCD3-203ENST00000392811 RALYQ9UKM9 306 aaKnown RBP20.77■□□□□ 0.91
SMARCD3-203ENST00000392811 C11orf94C9JXX5 98 aa20.76■□□□□ 0.91
SMARCD3-203ENST00000392811 RPL8P62917 257 aaKnown RBP20.76■□□□□ 0.91
SMARCD3-203ENST00000392811 RAB31Q13636 194 aa20.76■□□□□ 0.91
SMARCD3-203ENST00000392811 BSXQ3C1V8 233 aa20.76■□□□□ 0.91
SMARCD3-203ENST00000392811 C2orf83Q53S99 150 aa20.76■□□□□ 0.91
SMARCD3-203ENST00000392811 FAM122AQ96E09 287 aa20.76■□□□□ 0.91
SMARCD3-203ENST00000392811 COMMD5Q9GZQ3 224 aa20.76■□□□□ 0.91
SMARCD3-203ENST00000392811 TMEM133Q9H2Q1 129 aa20.76■□□□□ 0.91
SMARCD3-203ENST00000392811 WASHC3Q9Y3C0 194 aa20.76■□□□□ 0.91
SMARCD3-203ENST00000392811 TGIF2-C20orf24A0A0A6YYL0 155 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 STAG3L2P0CL84 134 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 STAG3L3P0CL85 134 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 RNASE2P10153 161 aaKnown RBP20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 IGFBP2P18065 325 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 RPS10P46783 165 aaKnown RBP20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 ADIRFQ15847 76 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 C1QL4Q86Z23 238 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 TGIF2LXQ8IUE1 241 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 LINC00518Q8N0U6 118 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 ABHD5Q8WTS1 349 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 NDUFA4L2Q9NRX3 87 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 ARL14EPLP0DKL9 152 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 USF1P22415 310 aaPredicted RBP20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 RPL29P47914 159 aaKnown RBP20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 ATP5IP56385 69 aaPredicted RBP20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 UBE2G2P60604 165 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 TMEM167AQ8TBQ9 72 aa20.75■□□□□ 0.91
SMARCD3-203ENST00000392811 C5orf52A6NGY3 159 aa20.74■□□□□ 0.91
SMARCD3-203ENST00000392811 CLDN34H7C241 214 aa20.74■□□□□ 0.91
SMARCD3-203ENST00000392811 IGHV2-70P01814 119 aa20.74■□□□□ 0.91
SMARCD3-203ENST00000392811 S100A6P06703 90 aa20.74■□□□□ 0.91
SMARCD3-203ENST00000392811 ZNF841Q6ZN19 808 aa20.74■□□□□ 0.91
SMARCD3-203ENST00000392811 MOB3BQ86TA1 216 aa20.74■□□□□ 0.91
SMARCD3-203ENST00000392811 OR1L8Q8NGR8 309 aa20.74■□□□□ 0.91
SMARCD3-203ENST00000392811 PCGF1Q9BSM1 259 aa20.74■□□□□ 0.91
SMARCD3-203ENST00000392811 ANKHD1Q8IWZ3 2542 aaKnown RBP20.74■□□□□ 0.91
SMARCD3-203ENST00000392811 IGLV2-23P01705 113 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 RND2P52198 227 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 SPNS3Q6ZMD2 512 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 TMEM204Q9BSN7 226 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 NPPCP23582 126 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 RPL23P62829 140 aaKnown RBP20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 PRR20EP86478 221 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 PRR20CP86479 221 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 PRR20DP86480 221 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 PRR20BP86481 221 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 PRR20AP86496 221 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 OR4A5Q8NH83 315 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 VSTM2AQ8TAG5 236 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 SSX3Q99909 188 aa20.73■□□□□ 0.91
SMARCD3-203ENST00000392811 E7EUB6 86 aa20.72■□□□□ 0.91
SMARCD3-203ENST00000392811 CXorf1O96002 111 aa20.72■□□□□ 0.91
SMARCD3-203ENST00000392811 ATP5G3P48201 142 aa20.72■□□□□ 0.91
SMARCD3-203ENST00000392811 CST9LP1Q5W188 147 aa20.72■□□□□ 0.91
SMARCD3-203ENST00000392811 SPTBN4Q9H254 2564 aa20.72■□□□□ 0.91
SMARCD3-203ENST00000392811 FSTL3O95633 263 aa20.71■□□□□ 0.91
SMARCD3-203ENST00000392811 PPOXP50336 477 aa20.71■□□□□ 0.91
SMARCD3-203ENST00000392811 DLX1P56177 255 aa20.71■□□□□ 0.91
SMARCD3-203ENST00000392811 TMEM144Q7Z5S9 345 aa20.71■□□□□ 0.91
SMARCD3-203ENST00000392811 CTDSP1Q9GZU7 261 aa20.71■□□□□ 0.91
SMARCD3-203ENST00000392811 SEPSECSQ9HD40 501 aaKnown RBP20.71■□□□□ 0.91
SMARCD3-203ENST00000392811 ATRXP46100 2492 aa20.71■□□□□ 0.91
SMARCD3-203ENST00000392811 LINC00869P0C866 280 aa20.71■□□□□ 0.91
SMARCD3-203ENST00000392811 IL3RAP26951 378 aa20.71■□□□□ 0.91
SMARCD3-203ENST00000392811 SPATA31B1PQ5VZV4 182 aa20.71■□□□□ 0.91
SMARCD3-203ENST00000392811 SLC45A2Q9UMX9 530 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms