RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TBL2Q9Y4P3 447 aaKnown RBP12.64□□□□□ -0.39
CCDC50-201ENST00000392455 PIGYQ3MUY2 71 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 COX14Q96I36 57 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 RTN4RQ9BZR6 473 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 ARHGAP32A7KAX9 2087 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 IGHV5-10-1A0A0J9YXX1 117 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 CGB1A6NKQ9 187 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 CDC42EP2O14613 210 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 LILRA1O75019 489 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 DUSP14O95147 198 aaKnown RBP12.64□□□□□ -0.39
CCDC50-201ENST00000392455 COX5BP10606 129 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 TINAGQ9UJW2 476 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 ERG28Q9UKR5 140 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 CTGFP29279 349 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 MESP2Q0VG99 397 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 FAM89BQ8N5H3 189 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 CHCHD1Q96BP2 118 aaKnown RBP12.64□□□□□ -0.39
CCDC50-201ENST00000392455 TMEM229AB2RXF0 380 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 ISG15P05161 165 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 SPINT1O43278 529 aa12.64□□□□□ -0.39
CCDC50-201ENST00000392455 PLCE1Q9P212 2302 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 A0A1W2PP11 408 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 IGHV4-39P01824 125 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 PRDM13Q9H4Q3 707 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 CCL4P13236 92 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 OPN3Q9H1Y3 402 aaPredicted RBP12.63□□□□□ -0.39
CCDC50-201ENST00000392455 TMEM258P61165 79 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 DRAM1Q8N682 238 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 LAMTOR3Q9UHA4 124 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 GREB1Q4ZG55 1949 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 MPTX1A8MV57 137 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 ATG4DQ86TL0 474 aaPredicted RBP12.63□□□□□ -0.39
CCDC50-201ENST00000392455 PRR33A8MZF0 331 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 CXCL3P19876 107 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 P2RY4P51582 365 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 RTN4RL2Q86UN3 420 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 OR4D11Q8NGI4 311 aa12.63□□□□□ -0.39
CCDC50-201ENST00000392455 HIST1H4AP62805 103 aaKnown RBP12.62□□□□□ -0.39
CCDC50-201ENST00000392455 HS3ST3B1Q9Y662 390 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 SIRT4Q9Y6E7 314 aaPredicted RBP12.62□□□□□ -0.39
CCDC50-201ENST00000392455 HILPDAQ9Y5L2 63 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 TRGV11A0A075B6L2 103 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 ITGB1BP1O14713 200 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 APOHP02749 345 aaPredicted RBP12.62□□□□□ -0.39
CCDC50-201ENST00000392455 HSD52Q0P140 79 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 PTPRDP23468 1912 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 KIAA0040Q15053 153 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 SLC50A1Q9BRV3 221 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 RPP21Q9H633 154 aaKnown RBP12.62□□□□□ -0.39
CCDC50-201ENST00000392455 AURKAIP1Q9NWT8 199 aaPredicted RBP12.62□□□□□ -0.39
CCDC50-201ENST00000392455 RND2P52198 227 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 CD69Q07108 199 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 OR11H7Q8NGC8 314 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 TMEM54Q969K7 222 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 IGHV3-21A0A0B4J1V1 117 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 IGF2P01344 180 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 LIFP15018 202 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 VN1R4Q7Z5H5 301 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 MRPL52Q86TS9 123 aaKnown RBP12.62□□□□□ -0.39
CCDC50-201ENST00000392455 NRTNQ99748 197 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 LOC105371242A0A075B767 164 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 ZP4Q12836 540 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 LILRA6Q6PI73 481 aa12.62□□□□□ -0.39
CCDC50-201ENST00000392455 DOCK4Q8N1I0 1966 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 LINC00305Q7Z4B0 112 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 TMEM252Q8N6L7 170 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 FER1L6-AS1Q8NA97 138 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 IL11P20809 199 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 FOXI3A8MTJ6 420 aaPredicted RBP12.61□□□□□ -0.39
CCDC50-201ENST00000392455 CCL19Q99731 98 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 GLI3P10071 1580 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 LEPROTO15243 131 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 CCL3P10147 92 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 MSRB3Q8IXL7 192 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 TRAV12-3A0A0B4J271 114 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 GGTLC1Q9BX51 225 aa12.61□□□□□ -0.39
CCDC50-201ENST00000392455 M0R381 172 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 GPR146Q96CH1 333 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 CALYQ9NYX4 217 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 IZUMO1RA6ND01 250 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 HRKO00198 91 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 ZIC1Q15915 447 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 BGLAPP02818 100 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 PRADC1Q9BSG0 188 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 NDUFA3O95167 84 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 HBDP02042 147 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 DLX4Q92988 240 aaPredicted RBP12.6□□□□□ -0.39
CCDC50-201ENST00000392455 PLEKHB2Q96CS7 222 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 NGFRP08138 427 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 FGFRL1Q8N441 504 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 OSR1Q8TAX0 266 aaPredicted RBP12.6□□□□□ -0.39
CCDC50-201ENST00000392455 COQ2Q96H96 371 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 UCN2Q96RP3 112 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 MIXL1Q9H2W2 232 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 RNF115Q9Y4L5 304 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 WNK3Q9BYP7 1800 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 CRYBB3P26998 211 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 C2orf68Q2NKX9 166 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 C1QL3Q5VWW1 255 aa12.6□□□□□ -0.39
CCDC50-201ENST00000392455 EAF1Q96JC9 268 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms