RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 TMEM144Q7Z5S9 345 aa11.38□□□□□ -0.59
NEK4-202ENST00000383721 MBD3L2Q8NHZ7 208 aaPredicted RBP11.38□□□□□ -0.59
NEK4-202ENST00000383721 ITLN1Q8WWA0 313 aa11.38□□□□□ -0.59
NEK4-202ENST00000383721 SAA2-SAA4A0A096LPE2 208 aa11.37□□□□□ -0.59
NEK4-202ENST00000383721 CXorf1O96002 111 aa11.37□□□□□ -0.59
NEK4-202ENST00000383721 SAA2P0DJI9 122 aaPredicted RBP11.37□□□□□ -0.59
NEK4-202ENST00000383721 DUX4L9Q6RFH8 374 aaPredicted RBP11.37□□□□□ -0.59
NEK4-202ENST00000383721 VHLLQ6RSH7 139 aa11.37□□□□□ -0.59
NEK4-202ENST00000383721 ZNF474Q6S9Z5 364 aaPredicted RBP11.37□□□□□ -0.59
NEK4-202ENST00000383721 ZNF843Q8N446 348 aa11.37□□□□□ -0.59
NEK4-202ENST00000383721 NPVFQ9HCQ7 196 aa11.37□□□□□ -0.59
NEK4-202ENST00000383721 SCO2A0A1W2PP80 73 aa11.37□□□□□ -0.59
NEK4-202ENST00000383721 ITGB1BP1O14713 200 aa11.37□□□□□ -0.59
NEK4-202ENST00000383721 IL6RP08887 468 aaPredicted RBP11.37□□□□□ -0.59
NEK4-202ENST00000383721 KLF3P57682 345 aaPredicted RBP11.37□□□□□ -0.59
NEK4-202ENST00000383721 RPL15P61313 204 aaKnown RBP11.37□□□□□ -0.59
NEK4-202ENST00000383721 OR4A47Q6IF82 309 aa11.37□□□□□ -0.59
NEK4-202ENST00000383721 INTS1Q8N201 2190 aaKnown RBP11.37□□□□□ -0.59
NEK4-202ENST00000383721 POLEQ07864 2286 aa11.37□□□□□ -0.59
NEK4-202ENST00000383721 DDTP30046 118 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 GLRXP35754 106 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 RAB7AP51149 207 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 SPATA31B1PQ5VZV4 182 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 FAM57AQ8TBR7 257 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 SFRP2Q96HF1 295 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 TXNDC17Q9BRA2 123 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 SEPSECSQ9HD40 501 aaKnown RBP11.36□□□□□ -0.59
NEK4-202ENST00000383721 FOXA2Q9Y261 457 aaPredicted RBP11.36□□□□□ -0.59
NEK4-202ENST00000383721 YTHDF2Q9Y5A9 579 aaKnown RBP11.36□□□□□ -0.59
NEK4-202ENST00000383721 A0A0U1RQK1 487 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 KBTBD11-OT1A0A1B0GTJ5 212 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 ZNF320A2RRD8 509 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 TSTD3H0UI37 97 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 MYOD1P15172 320 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 NPY1RP25929 384 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 FOXL1Q12952 345 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 TIMM23BQ5SRD1 257 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 DOLPP1Q86YN1 238 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 SLC24A4Q8NFF2 622 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 IMMP2LQ96T52 175 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 TMEM14BQ9NUH8 114 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 FAM215AQ9Y5M1 114 aa11.36□□□□□ -0.59
NEK4-202ENST00000383721 HCFC1P51610 2035 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 PAX1P15863 534 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 HSPE1P61604 102 aaKnown RBP11.35□□□□□ -0.59
NEK4-202ENST00000383721 EFNB3Q15768 340 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 STPG3Q8N7X2 389 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 NCOR1P1Q9H4R4 102 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 IDI2-AS1Q9NZ38 188 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 ZNF835Q9Y2P0 537 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 CA2P00918 260 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 GCHFRP30047 84 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 UQCRFS1P47985 274 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 TEPPQ6URK8 271 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 TCF23Q7RTU1 214 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 ST6GALNAC3Q8NDV1 305 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 SGMS2Q8NHU3 365 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 FAM222BQ8WU58 562 aa11.35□□□□□ -0.59
NEK4-202ENST00000383721 IGLV3-9A0A075B6K5 115 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 A0A087X0M5 115 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 A0A1B0GX30 115 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 THBS3P49746 956 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 CNN1P51911 297 aaKnown RBP11.34□□□□□ -0.59
NEK4-202ENST00000383721 MRPS11P82912 194 aaKnown RBP11.34□□□□□ -0.59
NEK4-202ENST00000383721 LYG1Q8N1E2 194 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.34□□□□□ -0.59
NEK4-202ENST00000383721 ZNF439Q8NDP4 499 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 OCC1Q8TAD7 63 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 ELOVL5Q9NYP7 299 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 HEATR1Q9H583 2144 aaKnown RBP11.34□□□□□ -0.59
NEK4-202ENST00000383721 TET2Q6N021 2002 aaPredicted RBP11.34□□□□□ -0.59
NEK4-202ENST00000383721 FLNCQ14315 2725 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 FOXH1O75593 365 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 HNF1AP20823 631 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 GATA4P43694 442 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 REC114Q7Z4M0 266 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 TRAPPC1Q9Y5R8 145 aa11.34□□□□□ -0.59
NEK4-202ENST00000383721 MDFIC2A0A1B0GVS7 189 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 PRRG2O14669 202 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 RHOBP62745 196 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 STUMQ69YW2 141 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 GCM1Q9NP62 436 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 CADP27708 2225 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 TRGV10A0A0A0MS01 117 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 GCGP01275 180 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 IGFBP2P18065 325 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 TIMP3P35625 211 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 RPL29P47914 159 aaKnown RBP11.33□□□□□ -0.6
NEK4-202ENST00000383721 RPL31P62899 125 aaKnown RBP11.33□□□□□ -0.6
NEK4-202ENST00000383721 PRR20EP86478 221 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 PRR20CP86479 221 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 PRR20DP86480 221 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 PRR20BP86481 221 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 PRR20AP86496 221 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 TEX38Q6PEX7 206 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 ZNF664Q8N3J9 261 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 DEFB108BQ8NET1 73 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 TMEM18Q96B42 140 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 HINT2Q9BX68 163 aa11.33□□□□□ -0.6
NEK4-202ENST00000383721 RNF7Q9UBF6 113 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms