RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 LINC00310P59036 64 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 TRAT1Q6PIZ9 186 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 TEPPQ6URK8 271 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 C1orf162Q8NEQ5 155 aaPredicted RBP16.69■□□□□ 0.26
CLN5-201ENST00000377453 DEFB124Q8NES8 71 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 OR4S2Q8NH73 311 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 SARAFQ96BY9 339 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 NDUFAF3Q9BU61 184 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 DMXL2Q8TDJ6 3036 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 SRRM4A7MD48 611 aaKnown RBP16.69■□□□□ 0.26
CLN5-201ENST00000377453 OR10J4P0C629 311 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 KRTCAP3Q53RY4 240 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 ZNF474Q6S9Z5 364 aaPredicted RBP16.69■□□□□ 0.26
CLN5-201ENST00000377453 ZNF292O60281 2723 aa16.69■□□□□ 0.26
CLN5-201ENST00000377453 IGKV1OR2-108A0A075B7D4 117 aa16.68■□□□□ 0.26
CLN5-201ENST00000377453 MRPS11P82912 194 aaKnown RBP16.68■□□□□ 0.26
CLN5-201ENST00000377453 FOXL1Q12952 345 aa16.68■□□□□ 0.26
CLN5-201ENST00000377453 OR52E5Q8NH55 327 aa16.68■□□□□ 0.26
CLN5-201ENST00000377453 IER3P46695 156 aa16.68■□□□□ 0.26
CLN5-201ENST00000377453 FXYD3Q14802 87 aa16.68■□□□□ 0.26
CLN5-201ENST00000377453 PSG5Q15238 335 aa16.68■□□□□ 0.26
CLN5-201ENST00000377453 DOLPP1Q86YN1 238 aa16.68■□□□□ 0.26
CLN5-201ENST00000377453 ZCCHC14Q8WYQ9 949 aaKnown RBP16.68■□□□□ 0.26
CLN5-201ENST00000377453 MS4A10Q96PG2 267 aa16.68■□□□□ 0.26
CLN5-201ENST00000377453 ZNF705FA8MVS1 300 aaPredicted RBP16.67■□□□□ 0.26
CLN5-201ENST00000377453 ZNF705DP0CH99 300 aaPredicted RBP16.67■□□□□ 0.26
CLN5-201ENST00000377453 ZNF705BP0CI00 300 aaPredicted RBP16.67■□□□□ 0.26
CLN5-201ENST00000377453 CD99P14209 185 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 CRYBB3P26998 211 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 TCL1AP56279 114 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 TMPRSS3P57727 454 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 OR51B2Q9Y5P1 312 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 IGHV3-48P01763 117 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 LINC00869P0C866 280 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 CGB3P0DN86 165 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 CGB7P0DN87 165 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 TAS2R60P59551 318 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 HSPE1P61604 102 aaKnown RBP16.67■□□□□ 0.26
CLN5-201ENST00000377453 ZCCHC24Q8N2G6 241 aaKnown RBP16.67■□□□□ 0.26
CLN5-201ENST00000377453 OR10W1Q8NGF6 305 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 RNASE7Q9H1E1 156 aaKnown RBP16.67■□□□□ 0.26
CLN5-201ENST00000377453 ENY2Q9NPA8 101 aa16.67■□□□□ 0.26
CLN5-201ENST00000377453 PPP1R35Q8TAP8 253 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 TMEM14BQ9NUH8 114 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 PTPRZ1P23471 2315 aaPredicted RBP16.66■□□□□ 0.26
CLN5-201ENST00000377453 TRAV17A0A0B4J275 112 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 SERF1AO75920 110 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 KLF3P57682 345 aaPredicted RBP16.66■□□□□ 0.26
CLN5-201ENST00000377453 RHOBP62745 196 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 TMEM249Q2WGJ8 235 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 KIAA1644Q3SXP7 199 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 OR1L6Q8NGR2 347 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 NOL4LQ96MY1 436 aaPredicted RBP16.66■□□□□ 0.26
CLN5-201ENST00000377453 MRPL18Q9H0U6 180 aaKnown RBP16.66■□□□□ 0.26
CLN5-201ENST00000377453 PARD6AQ9NPB6 346 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 ADGRG4Q8IZF6 3080 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 IQCJQ1A5X6 159 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 Q6ZWC4 215 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 OR8I2Q8N0Y5 310 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 NHLRC2Q8NBF2 726 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 CMTM2Q8TAZ6 248 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 LOXL4Q96JB6 756 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 EAF1Q96JC9 268 aaPredicted RBP16.66■□□□□ 0.26
CLN5-201ENST00000377453 NAGKQ9UJ70 344 aa16.66■□□□□ 0.26
CLN5-201ENST00000377453 ZNF318Q5VUA4 2279 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 FAM90A9PA6NNJ1 464 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 CDKN1AP38936 164 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 ERVFC1-1P60608 527 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 RAB4BP61018 213 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 CR1LQ2VPA4 569 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 OR9G1Q8NH87 305 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 ZNF503Q96F45 646 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 TBX15Q96SF7 602 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 RNF114Q9Y508 228 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 AKAP13Q12802 2813 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 KBTBD11-OT1A0A1B0GTJ5 212 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 LHBP01229 141 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 CCKARP32238 428 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 CENPWQ5EE01 88 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 PRR31Q5SQ13 230 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 MORN5Q5VZ52 161 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 PQLC2Q6ZP29 291 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 SNHG12Q9BXW3 62 aa16.65■□□□□ 0.26
CLN5-201ENST00000377453 TRGV8A0A0C4DH27 118 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 A0A1B0GWJ7 208 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 J3QR06 171 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 REG1BP48304 166 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 NABP2Q9BQ15 211 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 C2orf88Q9BSF0 95 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 GCM1Q9NP62 436 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 IL36BQ9NZH7 164 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 FOXA2Q9Y261 457 aaPredicted RBP16.64■□□□□ 0.25
CLN5-201ENST00000377453 TP53TG5Q9Y2B4 290 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 OR7C2O60412 319 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 OR10J1P30954 320 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 PRR20EP86478 221 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 PRR20CP86479 221 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 PRR20DP86480 221 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 PRR20BP86481 221 aa16.64■□□□□ 0.25
CLN5-201ENST00000377453 PRR20AP86496 221 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms