RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 COMPP49747 757 aaPredicted RBP11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 RPP30P78346 268 aaKnown RBP11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 KIAA1644Q3SXP7 199 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 MMD2Q8IY49 270 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 STPG3Q8N7X2 389 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 ST6GALNAC3Q8NDV1 305 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 EAF1Q96JC9 268 aaPredicted RBP11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 C20orf144Q9BQM9 153 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 CXXC4Q9H2H0 198 aa11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 KLF13Q9Y2Y9 288 aaPredicted RBP11.64□□□□□ -0.55
CLCNKA-202ENST00000375692 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 AHRRA9YTQ3 701 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 J3QW42 95 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 TIMM8AO60220 97 aaPredicted RBP11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 AARDQ4LEZ3 155 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 MORN2Q502X0 79 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 PRR7Q8TB68 274 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 FAM122AQ96E09 287 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 TXNDC17Q9BRA2 123 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 VAMP8Q9BV40 100 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 NPVFQ9HCQ7 196 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 TMEM140Q9NV12 185 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 FBXL7Q9UJT9 491 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 TCF19Q9Y242 345 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 LSM4Q9Y4Z0 139 aaKnown RBP11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 TRGV5A0A0B4J1U4 118 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 DLEU1O43261 78 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 GNB4Q9HAV0 340 aa11.63□□□□□ -0.55
CLCNKA-202ENST00000375692 ESDP10768 282 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 PRDX2P32119 198 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 TMPRSS3P57727 454 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 KRTDAPP60985 99 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 ERVK-16P61578 105 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 RANP62826 216 aaKnown RBP11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 MIR17HGQ75NE6 70 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 DOLPP1Q86YN1 238 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 GOLT1BQ9Y3E0 138 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 V9GYV3 84 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 M0QZK8 103 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 ADH4P08319 380 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 IGFBP2P18065 325 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 BRS3P32247 399 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 TFPI2P48307 235 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 TCL1AP56279 114 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 HTD2P86397 168 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 FXYD3Q14802 87 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 TMEM183BQ1AE95 376 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 RPEL1Q2QD12 228 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 SMIM21Q3B7S5 101 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 LRRC29Q8WV35 223 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 RNASE7Q9H1E1 156 aaKnown RBP11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 PTPRQQ9UMZ3 2332 aa11.62□□□□□ -0.55
CLCNKA-202ENST00000375692 IGHV3OR15-7A0A075B7D8 119 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 A8MXE2 369 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 CRYBB3P26998 211 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 RHOBP62745 196 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 ASPHD1Q5U4P2 390 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 TEPPQ6URK8 271 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 S1PR3Q99500 378 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 HINT2Q9BX68 163 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 BSNQ9UPA5 3926 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 CENPWQ5EE01 88 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 IGFL2Q6UWQ7 119 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 SPACA3Q8IXA5 215 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 SIGLECL1Q8N7X8 197 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 UHRF2Q96PU4 802 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 LPAR2Q9HBW0 351 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 DUSP13Q9UII6 198 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 PPIAL4AQ9Y536 164 aa11.61□□□□□ -0.55
CLCNKA-202ENST00000375692 TNCP24821 2201 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 HEATR1Q9H583 2144 aaKnown RBP11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 TRGV10A0A0A0MS01 117 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 CEACAM4O75871 244 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 PQLC2Q6ZP29 291 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 MOB3BQ86TA1 216 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 FAM90A1Q86YD7 464 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 CNEP1R1Q8N9A8 125 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 OR52E5Q8NH55 327 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 OPN3Q9H1Y3 402 aaPredicted RBP11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 NAT8BQ9UHF3 227 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 CA2P00918 260 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 GPX1P07203 203 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 GATA2P23769 480 aaPredicted RBP11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 Q0VG73 95 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 PSG5Q15238 335 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 Q8N976 141 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 TMEM178AQ8NBL3 297 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 ZNRF1Q8ND25 227 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 FAM216AQ8WUB2 273 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 C11orf52Q96A22 123 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 GMPPAQ96IJ6 420 aaPredicted RBP11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 RCHY1Q96PM5 261 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 IFI27L2Q9H2X8 130 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 CHODLQ9H9P2 273 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 MSRB2Q9Y3D2 182 aa11.6□□□□□ -0.55
CLCNKA-202ENST00000375692 IGKV1D-17A0A075B6S4 117 aa11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 HELTA6NFD8 242 aa11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 FAM90A9PA6NNJ1 464 aa11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 C9JCJ5 164 aa11.59□□□□□ -0.55
CLCNKA-202ENST00000375692 NPY1RP25929 384 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms