RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SDHCQ99643 169 aaPredicted RBP17.27■□□□□ 0.35
ECHDC1-203ENST00000368291 SRSF8Q9BRL6 282 aaKnown RBP17.27■□□□□ 0.35
ECHDC1-203ENST00000368291 NDUFA4L2Q9NRX3 87 aa17.27■□□□□ 0.35
ECHDC1-203ENST00000368291 TMEM14BQ9NUH8 114 aa17.27■□□□□ 0.35
ECHDC1-203ENST00000368291 SCP2D1Q9UJQ7 156 aa17.27■□□□□ 0.35
ECHDC1-203ENST00000368291 ANKRD34BA5PLL1 514 aa17.26■□□□□ 0.35
ECHDC1-203ENST00000368291 C15orf61A6NNL5 157 aa17.26■□□□□ 0.35
ECHDC1-203ENST00000368291 SNAPC5O75971 98 aa17.26■□□□□ 0.35
ECHDC1-203ENST00000368291 OR2J3O76001 311 aa17.26■□□□□ 0.35
ECHDC1-203ENST00000368291 IGKV1-5P01602 117 aa17.26■□□□□ 0.35
ECHDC1-203ENST00000368291 P0C879 139 aa17.26■□□□□ 0.35
ECHDC1-203ENST00000368291 HOXD3P31249 432 aaPredicted RBP17.26■□□□□ 0.35
ECHDC1-203ENST00000368291 KRTAP10-11P60412 298 aa17.26■□□□□ 0.35
ECHDC1-203ENST00000368291 EGFEM1PQ0D2K5 195 aa17.26■□□□□ 0.35
ECHDC1-203ENST00000368291 OR51B2Q9Y5P1 312 aa17.26■□□□□ 0.35
ECHDC1-203ENST00000368291 OR5AC1P0C628 307 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 TRAPPC2P0DI81 140 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 TRAPPC2BP0DI82 140 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 AP3S2P59780 193 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 WT1-ASQ06250 92 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 BAK1Q16611 211 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 IZUMO4Q1ZYL8 232 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 H2BFWTQ7Z2G1 175 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 NECAP1Q8NC96 275 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 GLYATL2Q8WU03 294 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 TMEM230Q96A57 120 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 TSC22D3Q99576 134 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 NAA60Q9H7X0 242 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 RANGRFQ9HD47 186 aaPredicted RBP17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 PRNDQ9UKY0 176 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 DMRT1Q9Y5R6 373 aa17.25■□□□□ 0.35
ECHDC1-203ENST00000368291 CRYM-AS1A6NIL9 109 aa17.24■□□□□ 0.35
ECHDC1-203ENST00000368291 B3GALNT1O75752 331 aa17.24■□□□□ 0.35
ECHDC1-203ENST00000368291 PDLIM3Q53GG5 364 aaPredicted RBP17.24■□□□□ 0.35
ECHDC1-203ENST00000368291 THOC7Q6I9Y2 204 aaKnown RBP17.24■□□□□ 0.35
ECHDC1-203ENST00000368291 LHFPL5Q8TAF8 219 aa17.24■□□□□ 0.35
ECHDC1-203ENST00000368291 GPR61Q9BZJ8 451 aa17.24■□□□□ 0.35
ECHDC1-203ENST00000368291 TMEM222Q9H0R3 208 aa17.24■□□□□ 0.35
ECHDC1-203ENST00000368291 IGLV11-55A0A075B6I3 123 aa17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 A6NHS1 94 aa17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 OVOL1O14753 267 aa17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 FAUP35544 74 aaKnown RBP17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 ATP5G2Q06055 141 aa17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 C15orf32Q32M92 178 aa17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 OR5B3Q8NH48 314 aa17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 AURKAIP1Q9NWT8 199 aaPredicted RBP17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 FKBP11Q9NYL4 201 aa17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 PEF1Q9UBV8 284 aaKnown RBP17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 FBXL7Q9UJT9 491 aa17.23■□□□□ 0.35
ECHDC1-203ENST00000368291 A0A0G2JRQ6 117 aa17.22■□□□□ 0.35
ECHDC1-203ENST00000368291 TEX13DA0A0J9YY54 714 aaPredicted RBP17.22■□□□□ 0.35
ECHDC1-203ENST00000368291 SEC14L6B5MCN3 397 aa17.22■□□□□ 0.35
ECHDC1-203ENST00000368291 NDUFB8O95169 186 aa17.22■□□□□ 0.35
ECHDC1-203ENST00000368291 CDS2O95674 445 aa17.22■□□□□ 0.35
ECHDC1-203ENST00000368291 EXOSC2Q13868 293 aaKnown RBP17.22■□□□□ 0.35
ECHDC1-203ENST00000368291 TRIM16LQ309B1 348 aa17.22■□□□□ 0.35
ECHDC1-203ENST00000368291 C9orf66Q5T8R8 295 aa17.22■□□□□ 0.35
ECHDC1-203ENST00000368291 DEDD2Q8WXF8 326 aa17.22■□□□□ 0.35
ECHDC1-203ENST00000368291 OR13C7P0DN81 318 aa17.21■□□□□ 0.35
ECHDC1-203ENST00000368291 OR4A16Q8NH70 328 aa17.21■□□□□ 0.35
ECHDC1-203ENST00000368291 HINT2Q9BX68 163 aa17.21■□□□□ 0.35
ECHDC1-203ENST00000368291 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.2■□□□□ 0.34
ECHDC1-203ENST00000368291 A0A0B4J293 547 aa17.2■□□□□ 0.34
ECHDC1-203ENST00000368291 DHFRP00374 187 aa17.2■□□□□ 0.34
ECHDC1-203ENST00000368291 DEFA4P12838 97 aa17.2■□□□□ 0.34
ECHDC1-203ENST00000368291 ZP3P21754 424 aa17.2■□□□□ 0.34
ECHDC1-203ENST00000368291 AKR1C2P52895 323 aa17.2■□□□□ 0.34
ECHDC1-203ENST00000368291 HSD17B13Q7Z5P4 300 aaPredicted RBP17.2■□□□□ 0.34
ECHDC1-203ENST00000368291 LSM10Q969L4 123 aaKnown RBP17.2■□□□□ 0.34
ECHDC1-203ENST00000368291 GALNT14Q96FL9 552 aa17.2■□□□□ 0.34
ECHDC1-203ENST00000368291 SCGB3A2Q96PL1 93 aa17.2■□□□□ 0.34
ECHDC1-203ENST00000368291 HIST1H1BP16401 226 aaKnown RBP17.19■□□□□ 0.34
ECHDC1-203ENST00000368291 MFAP2P55001 183 aa17.19■□□□□ 0.34
ECHDC1-203ENST00000368291 SUPT4H1P63272 117 aaKnown RBP17.19■□□□□ 0.34
ECHDC1-203ENST00000368291 KLF5Q13887 457 aaPredicted RBP17.19■□□□□ 0.34
ECHDC1-203ENST00000368291 ZNF57Q68EA5 555 aaPredicted RBP17.19■□□□□ 0.34
ECHDC1-203ENST00000368291 ACSM6Q6P461 480 aa17.19■□□□□ 0.34
ECHDC1-203ENST00000368291 ZNF429Q86V71 674 aa17.19■□□□□ 0.34
ECHDC1-203ENST00000368291 SELENOHQ8IZQ5 122 aaKnown RBP17.19■□□□□ 0.34
ECHDC1-203ENST00000368291 CCDC140Q96MF4 163 aa17.19■□□□□ 0.34
ECHDC1-203ENST00000368291 S4R3C0 116 aa17.19■□□□□ 0.34
ECHDC1-203ENST00000368291 BMPR1BO00238 502 aa17.18■□□□□ 0.34
ECHDC1-203ENST00000368291 HSPE1P61604 102 aaKnown RBP17.18■□□□□ 0.34
ECHDC1-203ENST00000368291 DHODHQ02127 395 aa17.18■□□□□ 0.34
ECHDC1-203ENST00000368291 TMEM187Q14656 261 aa17.18■□□□□ 0.34
ECHDC1-203ENST00000368291 Q6ZRM9 215 aa17.18■□□□□ 0.34
ECHDC1-203ENST00000368291 REC114Q7Z4M0 266 aa17.18■□□□□ 0.34
ECHDC1-203ENST00000368291 SGPP2Q8IWX5 399 aa17.18■□□□□ 0.34
ECHDC1-203ENST00000368291 RBPMSQ93062 196 aaKnown RBP17.18■□□□□ 0.34
ECHDC1-203ENST00000368291 TMEM56Q96MV1 263 aa17.18■□□□□ 0.34
ECHDC1-203ENST00000368291 SORL1Q92673 2214 aa17.17■□□□□ 0.34
ECHDC1-203ENST00000368291 MFSD2BA6NFX1 497 aa17.17■□□□□ 0.34
ECHDC1-203ENST00000368291 ATG12O94817 140 aa17.17■□□□□ 0.34
ECHDC1-203ENST00000368291 IGHV3-23P01764 117 aa17.17■□□□□ 0.34
ECHDC1-203ENST00000368291 PRCDQ00LT1 54 aa17.17■□□□□ 0.34
ECHDC1-203ENST00000368291 CNPY1Q3B7I2 92 aa17.17■□□□□ 0.34
ECHDC1-203ENST00000368291 PRR13Q9NZ81 148 aa17.17■□□□□ 0.34
ECHDC1-203ENST00000368291 F11RQ9Y624 299 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-203ENST00000368291 TMEM56-RWDD3S4R434 201 aa17.17■□□□□ 0.34
ECHDC1-203ENST00000368291 AKR1C4P17516 323 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms