RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 LEMD1Q68G75 181 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 SPSB4Q96A44 273 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 MAP1LC3AQ9H492 121 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 NPCDR1Q9BY65 106 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 WNT10AQ9GZT5 417 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 IGLV3-12A0A075B6K2 115 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 RNASE4P34096 147 aaKnown RBP10.83□□□□□ -0.68
PTPRK-207ENST00000368226 LYRM7Q5U5X0 104 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 WBP1Q96G27 269 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 IFI27L2Q9H2X8 130 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 ZNF318Q5VUA4 2279 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 GCGP01275 180 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 C2orf68Q2NKX9 166 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 CBLN4Q9NTU7 201 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 CEACAM4O75871 244 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 SRD5A1P18405 259 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 SPTA1P02549 2419 aa10.83□□□□□ -0.68
PTPRK-207ENST00000368226 A0A1B0GTI1 187 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 PQLC2LA1A4F0 135 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 DNLZQ5SXM8 178 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 OR4X2Q8NGF9 303 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 DUX3Q96PT4 197 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 THBDP07204 575 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 SAA1P0DJI8 122 aaPredicted RBP10.82□□□□□ -0.68
PTPRK-207ENST00000368226 GTF3AQ92664 365 aaKnown RBP10.82□□□□□ -0.68
PTPRK-207ENST00000368226 GALNT14Q96FL9 552 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 SNRNP200O75643 2136 aaKnown RBP10.82□□□□□ -0.68
PTPRK-207ENST00000368226 LOC102723996A0A087X1L8 192 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 TRAV40A0A0B4J280 105 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 PRR32B1ATL7 298 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 NTN3O00634 580 aaPredicted RBP10.82□□□□□ -0.68
PTPRK-207ENST00000368226 AGAP20933 346 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 WDR82Q6UXN9 313 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 TEX45Q8NA69 505 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 A0A0G2JMZ2 1700 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 LRRC37A2A6NM11 1700 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 TRAV24A0A0B4J272 114 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 J3QW42 95 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 NPFFO15130 113 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 TSPOP30536 169 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 UCP3P55916 312 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 RTBDNQ9BSG5 229 aaPredicted RBP10.82□□□□□ -0.68
PTPRK-207ENST00000368226 TM2D1Q9BX74 207 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 C21orf62Q9NYP8 219 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 ZNF319Q9P2F9 582 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 RALGAPA2Q2PPJ7 1873 aa10.82□□□□□ -0.68
PTPRK-207ENST00000368226 RAMP3O60896 148 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 PRSS2P07478 247 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 SPATA45Q537H7 98 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 FAM186AA6NE01 2351 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 TRBV20OR9-2A0A075B6H5 130 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 FOXA3P55318 350 aaPredicted RBP10.81□□□□□ -0.68
PTPRK-207ENST00000368226 ADIPOQQ15848 244 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 TM4SF5O14894 197 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 Q0VFX4 171 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 IGKV1D-13A0A0B4J2D9 117 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 SLC17A3O00476 420 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 IGKV1-13P0DP09 117 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 HINT1P49773 126 aaPredicted RBP10.81□□□□□ -0.68
PTPRK-207ENST00000368226 MOB4Q9Y3A3 225 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 LOC107984156A0A0G2JMH3 177 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 VDAC2P45880 294 aaPredicted RBP10.81□□□□□ -0.68
PTPRK-207ENST00000368226 ARL17AQ8IVW1 177 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 CLDND2Q8NHS1 167 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 LHFPL5Q8TAF8 219 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 SFRP2Q96HF1 295 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 C18orf15Q96N68 181 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 KLHDC3Q9BQ90 382 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 CACNA1EQ15878 2313 aa10.81□□□□□ -0.68
PTPRK-207ENST00000368226 A0A0B4J293 547 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 SCO2A0A1W2PP80 73 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 SELLP14151 372 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 MEIG1Q5JSS6 88 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 MIR17HGQ75NE6 70 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 ZIC4Q8N9L1 334 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 LINC00312Q9Y6C7 94 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 GGCTO75223 188 aaKnown RBP10.8□□□□□ -0.68
PTPRK-207ENST00000368226 LEPROTL1O95214 131 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 OSR1Q8TAX0 266 aaPredicted RBP10.8□□□□□ -0.68
PTPRK-207ENST00000368226 A6NDN8 102 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 DANCRP0C864 163 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 PPP1R17O96001 155 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 TAS2R60P59551 318 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 PAQR4Q8N4S7 273 aaPredicted RBP10.8□□□□□ -0.68
PTPRK-207ENST00000368226 MRPL32Q9BYC8 188 aaKnown RBP10.8□□□□□ -0.68
PTPRK-207ENST00000368226 HLA-DRB1P01911 266 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 KLRD1Q13241 179 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 OR4D5Q8NGN0 318 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 LINC01587Q99440 93 aa10.8□□□□□ -0.68
PTPRK-207ENST00000368226 EFNA2O43921 213 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 GCSAMLQ5JQS6 135 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 RPRMQ9NS64 109 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 SCN8AQ9UQD0 1980 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 IGKV1-9A0A0C4DH69 117 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 NBEAP1P0C6P0 100 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 LGALS3P17931 250 aaKnown RBP10.79□□□□□ -0.68
PTPRK-207ENST00000368226 ATP5G3P48201 142 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 GNG5P63218 68 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 BIVMQ86UB2 503 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 TMEM219Q86XT9 240 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms