RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 PRR31Q5SQ13 230 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 SPSB3Q6PJ21 355 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 SPRED2Q7Z698 418 aa4.91□□□□□ -1.62
BRCA1-203ENST00000357654 NUP205Q92621 2012 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 NDUFB6O95139 128 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 ZFPL1O95159 310 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 SLC25A1P53007 311 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 Q0VFX4 171 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 IMMP1LQ96LU5 166 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 PARD6GQ9BYG4 376 aaPredicted RBP4.9□□□□□ -1.62
BRCA1-203ENST00000357654 G6PC2Q9NQR9 355 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 PEF1Q9UBV8 284 aaKnown RBP4.9□□□□□ -1.62
BRCA1-203ENST00000357654 H3BUX3 64 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 NXPH4O95158 308 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 F12P00748 615 aaPredicted RBP4.9□□□□□ -1.62
BRCA1-203ENST00000357654 TFF1P04155 84 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 KLF5Q13887 457 aaPredicted RBP4.9□□□□□ -1.62
BRCA1-203ENST00000357654 SIGLEC15Q6ZMC9 328 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 FAM19A2Q8N3H0 131 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 RHOVQ96L33 236 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 SRXN1Q9BYN0 137 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 KLF12Q9Y4X4 402 aa4.9□□□□□ -1.62
BRCA1-203ENST00000357654 VIRMAQ69YN4 1812 aaKnown RBP4.9□□□□□ -1.62
BRCA1-203ENST00000357654 C15orf61A6NNL5 157 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 H3BQ15 152 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 CELA3AP09093 270 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 CRYBA2P53672 197 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 TCTEX1D4Q5JR98 221 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 MRPL14Q6P1L8 145 aaKnown RBP4.9□□□□□ -1.63
BRCA1-203ENST00000357654 CYP2G1PQ6ZSU1 146 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 SIGLEC7Q9Y286 467 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 SPCS1Q9Y6A9 102 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 SPNP16150 400 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 UBE2E1P51965 193 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 LSM6P62312 80 aaKnown RBP4.9□□□□□ -1.63
BRCA1-203ENST00000357654 RMI2Q96E14 147 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 GSX2Q9BZM3 304 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 XCL2Q9UBD3 114 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 ZNF257Q9Y2Q1 563 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-203ENST00000357654 IGKV1D-12P01611 117 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 PFN2P35080 140 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 GPX4P36969 197 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-203ENST00000357654 PAX8Q06710 450 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 CD300EQ496F6 205 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-203ENST00000357654 MSRB2Q9Y3D2 182 aa4.9□□□□□ -1.63
BRCA1-203ENST00000357654 TRAV12-1A0A0B4J245 112 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE12JA6NER3 117 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 TIMM23O14925 209 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 CXCL10P02778 98 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 RPL36AP83881 106 aaKnown RBP4.89□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE1Q13065 139 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE4Q13068 117 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE5Q13069 117 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE13Q4V321 117 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 FER1L6-AS1Q8NA97 138 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 RPL36ALQ969Q0 106 aaKnown RBP4.89□□□□□ -1.63
BRCA1-203ENST00000357654 IGLV3-10A0A075B6K4 115 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 TRAV1-2A0A0B4J238 106 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 C1QBP02746 253 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 C8orf88P0DMB2 117 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 DSCR9P59020 149 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 TMEM45BQ96B21 275 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 RARRES2Q99969 163 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 CCL3L1P16619 93 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 GNG5P63218 68 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 ZNF876PQ49A33 203 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 C9orf153Q5TBE3 101 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 IGF2BP2-AS1Q96M15 143 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 NABP2Q9BQ15 211 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 ZNF729A6NN14 1252 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-203ENST00000357654 SMIM18P0DKX4 95 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 ZNF79Q15937 498 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 RUSC1-AS1Q66K80 236 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 DTX1Q86Y01 620 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 LINC01356Q8N9X3 169 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 BAZ2AQ9UIF9 1905 aaKnown RBP4.89□□□□□ -1.63
BRCA1-203ENST00000357654 M0QZK8 103 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 SLC25A39Q9BZJ4 359 aaPredicted RBP4.89□□□□□ -1.63
BRCA1-203ENST00000357654 CLDN16Q9Y5I7 305 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 KNCNA6PVL3 124 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 H0YL77 283 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 LGALS1P09382 135 aaKnown RBP4.89□□□□□ -1.63
BRCA1-203ENST00000357654 FOLR2P14207 255 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 APOC4P55056 127 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 VWC2Q2TAL6 325 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE2AQ6NT46 116 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 SLC25A34Q6PIV7 304 aa4.89□□□□□ -1.63
BRCA1-203ENST00000357654 MRM2Q9UI43 246 aaKnown RBP4.89□□□□□ -1.63
BRCA1-203ENST00000357654 CHTOPQ9Y3Y2 248 aaKnown RBP4.89□□□□□ -1.63
BRCA1-203ENST00000357654 NRAPQ86VF7 1730 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE12BA1L429 117 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 MPTX1A8MV57 137 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE7O76087 117 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 TNFRSF6BO95407 300 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE12FP0CL80 117 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE12GP0CL81 117 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE12IP0CL82 117 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 HOXA6P31267 233 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 EVX1P49640 407 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms