RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 MRPS11P82912 194 aaKnown RBP14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 ASPHD1Q5U4P2 390 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 DEFB124Q8NES8 71 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 OR4S2Q8NH73 311 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 PPP1R35Q8TAP8 253 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 FAM216AQ8WUB2 273 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 IDI2-AS1Q9NZ38 188 aa14.84□□□□□ -0.03
PTP4A3-202ENST00000349124 YLPM1P49750 1951 aaKnown RBP14.83□□□□□ -0.03
PTP4A3-202ENST00000349124 SPINK4O60575 86 aa14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 LHBP01229 141 aa14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 HSPE1P61604 102 aaKnown RBP14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 ZCCHC14Q8WYQ9 949 aaKnown RBP14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 CCL13Q99616 98 aa14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 LRFN3Q9BTN0 628 aa14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 TP53TG3Q9ULZ0 132 aa14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 OTOGLQ3ZCN5 2332 aa14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 IGKV1OR2-108A0A075B7D4 117 aa14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 ZNF90Q03938 601 aa14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 TMEM14BQ9NUH8 114 aa14.83□□□□□ -0.04
PTP4A3-202ENST00000349124 LINC00869P0C866 280 aa14.82□□□□□ -0.04
PTP4A3-202ENST00000349124 FAM216BQ8N7L0 139 aa14.82□□□□□ -0.04
PTP4A3-202ENST00000349124 FKBP11Q9NYL4 201 aa14.82□□□□□ -0.04
PTP4A3-202ENST00000349124 KBTBD11-OT1A0A1B0GTJ5 212 aa14.82□□□□□ -0.04
PTP4A3-202ENST00000349124 F2Z2F3 143 aa14.82□□□□□ -0.04
PTP4A3-202ENST00000349124 RND1Q92730 232 aa14.82□□□□□ -0.04
PTP4A3-202ENST00000349124 OR51B2Q9Y5P1 312 aa14.82□□□□□ -0.04
PTP4A3-202ENST00000349124 CFHR2P36980 270 aa14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 KLF3P57682 345 aaPredicted RBP14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 IGFL2Q6UWQ7 119 aa14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 NDUFAF3Q9BU61 184 aa14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 TUBG2Q9NRH3 451 aa14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 EREGO14944 169 aa14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 LINC00310P59036 64 aa14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 PSG5Q15238 335 aa14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 TDRG1Q3Y452 100 aa14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 KRTCAP3Q53RY4 240 aa14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 ASCL3Q9NQ33 180 aa14.81□□□□□ -0.04
PTP4A3-202ENST00000349124 CRYBB3P26998 211 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 RHOBP62745 196 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 SLC35B1P78383 322 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 ZCCHC24Q8N2G6 241 aaKnown RBP14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 ATG101Q9BSB4 218 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 ENY2Q9NPA8 101 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 TRGV8A0A0C4DH27 118 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 OR10J4P0C629 311 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 PRR20EP86478 221 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 PRR20CP86479 221 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 PRR20DP86480 221 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 PRR20BP86481 221 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 PRR20AP86496 221 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 MZT1Q08AG7 82 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 OR10W1Q8NGF6 305 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 MS4A10Q96PG2 267 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 GCM1Q9NP62 436 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 FOXA2Q9Y261 457 aaPredicted RBP14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 POLR3KQ9Y2Y1 108 aaPredicted RBP14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 PCNX1Q96RV3 2341 aa14.8□□□□□ -0.04
PTP4A3-202ENST00000349124 J3QR06 171 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 CCKARP32238 428 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 DOLPP1Q86YN1 238 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 ZNF503Q96F45 646 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 NOL4LQ96MY1 436 aaPredicted RBP14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 PKDREJQ9NTG1 2253 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 CBLN4Q9NTU7 201 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 IER3P46695 156 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 RPL29P47914 159 aaKnown RBP14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 EAF1Q96JC9 268 aaPredicted RBP14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 CT45A6P0DMU7 189 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 CT45A5P0DMU8 189 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 CT45A7P0DMV0 189 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 YPEL3P61236 119 aaPredicted RBP14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 FAM27E3Q08E93 113 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 IQCJQ1A5X6 159 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 TGIF2LXQ8IUE1 241 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 OR9G1Q8NH87 305 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 TP53TG5Q9Y2B4 290 aa14.79□□□□□ -0.04
PTP4A3-202ENST00000349124 FTH1P19P0C7X4 201 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 RAB7AP51149 207 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 TAS2R60P59551 318 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 ERVFC1-1P60608 527 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 RAB4BP61018 213 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 NABP2Q9BQ15 211 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 MRPL18Q9H0U6 180 aaKnown RBP14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 RNASE7Q9H1E1 156 aaKnown RBP14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 IL36BQ9NZH7 164 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 SPTBN2O15020 2390 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 TRGV10A0A0A0MS01 117 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 GLRXP35754 106 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 KIR2DS2P43631 304 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 FXYD3Q14802 87 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 PQLC2Q6ZP29 291 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 ZNF439Q8NDP4 499 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 NEUROG1Q92886 237 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 SLC45A2Q9UMX9 530 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 FAM215AQ9Y5M1 114 aa14.78□□□□□ -0.04
PTP4A3-202ENST00000349124 RIF1Q5UIP0 2472 aaKnown RBP14.77□□□□□ -0.04
PTP4A3-202ENST00000349124 ZNF705FA8MVS1 300 aaPredicted RBP14.77□□□□□ -0.04
PTP4A3-202ENST00000349124 IGHV3-48P01763 117 aa14.77□□□□□ -0.04
PTP4A3-202ENST00000349124 ZNF705DP0CH99 300 aaPredicted RBP14.77□□□□□ -0.04
PTP4A3-202ENST00000349124 ZNF705BP0CI00 300 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms