RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 LHFPL5Q8TAF8 219 aa16.2■□□□□ 0.18
SMARCB1-202ENST00000344921 TMEM14BQ9NUH8 114 aa16.2■□□□□ 0.18
SMARCB1-202ENST00000344921 FLVCR2Q9UPI3 526 aa16.2■□□□□ 0.18
SMARCB1-202ENST00000344921 REG1AP05451 166 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 AREGP15514 252 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 BCAP31P51572 246 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 OR5B3Q8NH48 314 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 MYOZ3Q8TDC0 251 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 TMEM56Q96MV1 263 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 TMEM56-RWDD3S4R434 201 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 CGB1A6NKQ9 187 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 DBX1A6NMT0 343 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 PRH1P02810 166 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 DEFA4P12838 97 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 MECP2P51608 486 aaKnown RBP16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 KIAA0141Q14154 515 aaPredicted RBP16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 MZT2BQ6NZ67 158 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 OR10W1Q8NGF6 305 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 C4orf3Q8WVX3 66 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 GNB4Q9HAV0 340 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 ZNF257Q9Y2Q1 563 aa16.19■□□□□ 0.18
SMARCB1-202ENST00000344921 NPIPB5A8MRT5 1133 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 DHFRP00374 187 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 IGHV3-11P01762 117 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 PSMB6P28072 239 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 SRPXP78539 464 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 PPP1R1AQ13522 171 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 DEFB136Q30KP8 78 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 THOC7Q6I9Y2 204 aaKnown RBP16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 FAM219AQ8IW50 185 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 LGI3Q8N145 548 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 DUX3Q96PT4 197 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 PDCD10Q9BUL8 212 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 NDUFA4L2Q9NRX3 87 aa16.18■□□□□ 0.18
SMARCB1-202ENST00000344921 A0A0G2JLM5 398 aa16.17■□□□□ 0.18
SMARCB1-202ENST00000344921 A0A0G2JRQ6 117 aa16.17■□□□□ 0.18
SMARCB1-202ENST00000344921 C13orf42A0A1B0GVH6 325 aa16.17■□□□□ 0.18
SMARCB1-202ENST00000344921 RAB25P57735 213 aa16.17■□□□□ 0.18
SMARCB1-202ENST00000344921 SLC35G3Q8N808 338 aa16.17■□□□□ 0.18
SMARCB1-202ENST00000344921 IL22RA2Q969J5 263 aa16.17■□□□□ 0.18
SMARCB1-202ENST00000344921 SRSF8Q9BRL6 282 aaKnown RBP16.17■□□□□ 0.18
SMARCB1-202ENST00000344921 WNK1Q9H4A3 2382 aa16.17■□□□□ 0.18
SMARCB1-202ENST00000344921 A0A0B4J293 547 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 FAM240BA0A1B0GVZ2 78 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 P0C879 139 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 OR13C7P0DN81 318 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 DEFA5Q01523 94 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 HSD17B13Q7Z5P4 300 aaPredicted RBP16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 LSM10Q969L4 123 aaKnown RBP16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 TBC1D24Q9ULP9 559 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 PIGBOS1A0A0B4J2F0 54 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 IGLC7A0M8Q6 106 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 CCL24O00175 119 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 SFT2D2O95562 160 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 IFNA17P01571 189 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 TCRBP04435 133 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 CTRB1P17538 263 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 UBE2MP61081 183 aaKnown RBP16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 HSPE1P61604 102 aaKnown RBP16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 CTRB2Q6GPI1 263 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 C19orf35Q6ZS72 473 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 C20orf85Q9H1P6 137 aa16.16■□□□□ 0.18
SMARCB1-202ENST00000344921 VWFP04275 2813 aa16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 BRI3O95415 125 aa16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 HLA-AP01891 365 aaKnown RBP16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 CRYGCP07315 174 aa16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 ANXA7P20073 488 aaKnown RBP16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 RHOGP84095 191 aa16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 ASAH1Q13510 395 aa16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 C4orf46Q504U0 113 aa16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 LYZL2Q7Z4W2 148 aa16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 ZNF429Q86V71 674 aa16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 OR11H1Q8NG94 326 aa16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 RAX2Q96IS3 184 aa16.15■□□□□ 0.18
SMARCB1-202ENST00000344921 TRAV6A0A075B6T7 132 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 A0A0B4J2A0 478 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 I3L521 148 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 ST8SIA3O43173 380 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 OR2J3O76001 311 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 MYCNOSP40205 109 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 WT1-ASQ06250 92 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 OXA1LQ15070 435 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 MRPL41Q8IXM3 137 aaKnown RBP16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 GPR146Q96CH1 333 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 USMG5Q96IX5 58 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 ALX4Q9H161 411 aaPredicted RBP16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 CACNG5Q9UF02 275 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 SHPKQ9UHJ6 478 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 ATP6V1G1O75348 118 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 LGALS1P09382 135 aaKnown RBP16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 OR4E1P0C645 316 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 CD33P20138 364 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 PRCDQ00LT1 54 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 IFITM3Q01628 133 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 ANKRD55Q3KP44 614 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 SPINK9Q5DT21 86 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 Q6ZRM9 215 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 DPF1Q92782 380 aa16.14■□□□□ 0.17
SMARCB1-202ENST00000344921 PLEKHA3Q9HB20 300 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms