RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 C7orf50Q9BRJ6 194 aaKnown RBP11.96□□□□□ -0.49
TNFRSF12A-202ENST00000341627 NSG2Q9Y328 171 aa11.96□□□□□ -0.49
TNFRSF12A-202ENST00000341627 TEX50A0A1B0GTY4 177 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 LINC00854A0A1B0GVQ3 168 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 A0A1B0GW64 132 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 FAM223BA6NKX1 122 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 C15orf61A6NNL5 157 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 RBMXL2O75526 392 aaKnown RBP11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 CDS2O95674 445 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 IGHV3-11P01762 117 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 CRYGCP07315 174 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 ANXA3P12429 323 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 AREGP15514 252 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 AKR1C4P17516 323 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 PSMB6P28072 239 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 RAB25P57735 213 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 RBMS2Q15434 407 aaKnown RBP11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 SAMD5Q5TGI4 173 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 TMED4Q7Z7H5 227 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 FAM223AQ8IWN6 122 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 GLYATL2Q8WU03 294 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 GALNT14Q96FL9 552 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 CCDC32Q9BV29 185 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 HINT2Q9BX68 163 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 TMEM14BQ9NUH8 114 aa11.95□□□□□ -0.5
TNFRSF12A-202ENST00000341627 IGLC7A0M8Q6 106 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 CGB1A6NKQ9 187 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 DUS4LO95620 317 aaKnown RBP11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 IGKV1-5P01602 117 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 PRH1P02810 166 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 OR8U8P0C7N1 319 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 DEFA4P12838 97 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 HIST1H1BP16401 226 aaKnown RBP11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 RHOGP84095 191 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 ZNF616Q08AN1 781 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 FHL3Q13643 280 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 BEAN1Q3B7T3 259 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 KPRPQ5T749 579 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 FAM219AQ8IW50 185 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 NECAP1Q8NC96 275 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 RBPMSQ93062 196 aaKnown RBP11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 LSM10Q969L4 123 aaKnown RBP11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 TMEM230Q96A57 120 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 RCC1LQ96I51 464 aaKnown RBP11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 TMEM56Q96MV1 263 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 NDUFA4L2Q9NRX3 87 aa11.94□□□□□ -0.5
TNFRSF12A-202ENST00000341627 TRBV9A0A0B4J1U6 114 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 PIGBOS1A0A0B4J2F0 54 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 CYB5BO43169 146 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 HSPB1P04792 205 aaKnown RBP11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 CTRB1P17538 263 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 MECP2P51608 486 aaKnown RBP11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 SRPXP78539 464 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 ATP5G2Q06055 141 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 TMEM128Q5BJH2 165 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 TMEM268Q5VZI3 342 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 CTRB2Q6GPI1 263 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 IL22RA2Q969J5 263 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 MCRIP2Q9BUT9 160 aaKnown RBP11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 ALX4Q9H161 411 aaPredicted RBP11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 TGP01266 2768 aa11.93□□□□□ -0.5
TNFRSF12A-202ENST00000341627 LINC01619G3V211 115 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 OR2J3O76001 311 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 NDUFB6O95139 128 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 REG1AP05451 166 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 P0C879 139 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 OR13C7P0DN81 318 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 CCR6P51684 374 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 HSPE1P61604 102 aaKnown RBP11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 TMEM187Q14656 261 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 OXLD1Q5BKU9 147 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 FAM209BQ5JX69 171 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 ZNF429Q86V71 674 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 SELENOHQ8IZQ5 122 aaKnown RBP11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 CENPSQ8N2Z9 138 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 OR10W1Q8NGF6 305 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 PDCD10Q9BUL8 212 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 GPR61Q9BZJ8 451 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 WDR12Q9GZL7 423 aaKnown RBP11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 RANGRFQ9HD47 186 aaPredicted RBP11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 TMEM56-RWDD3S4R434 201 aa11.92□□□□□ -0.5
TNFRSF12A-202ENST00000341627 IGHV4OR15-8A0A075B7B6 117 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 A0A087WW49 117 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 DBX1A6NMT0 343 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 IGLL1P15814 213 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 SUPT4H1P63272 117 aaKnown RBP11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 DEFA5Q01523 94 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 ZNF846Q147U1 533 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 IZUMO4Q1ZYL8 232 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 ZNF343Q6P1L6 599 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 LGI3Q8N145 548 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 LHFPL5Q8TAF8 219 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 THYN1Q9P016 225 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 FBXL7Q9UJT9 491 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 DNAH3Q8TD57 4116 aa11.91□□□□□ -0.5
TNFRSF12A-202ENST00000341627 IGLV11-55A0A075B6I3 123 aa11.9□□□□□ -0.5
TNFRSF12A-202ENST00000341627 A0A0B4J293 547 aa11.9□□□□□ -0.5
TNFRSF12A-202ENST00000341627 IFNA17P01571 189 aa11.9□□□□□ -0.5
TNFRSF12A-202ENST00000341627 ZP3P21754 424 aa11.9□□□□□ -0.5
TNFRSF12A-202ENST00000341627 VAMP1P23763 118 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms