RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TRAPPC2P0DI81 140 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 TRAPPC2BP0DI82 140 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 CTRB1P17538 263 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 AKR1C2P52895 323 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 RHOGP84095 191 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 IZUMO4Q1ZYL8 232 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 CTRB2Q6GPI1 263 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 SGPP2Q8IWX5 399 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 OR4A16Q8NH70 328 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 DPF1Q92782 380 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 RCC1LQ96I51 464 aaKnown RBP11.78□□□□□ -0.52
UBE3B-201ENST00000340074 USMG5Q96IX5 58 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 AKIP1Q9NQ31 210 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 BATF3Q9NR55 127 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 NDUFA4L2Q9NRX3 87 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 FKBP11Q9NYL4 201 aa11.78□□□□□ -0.52
UBE3B-201ENST00000340074 LINC00854A0A1B0GVQ3 168 aa11.77□□□□□ -0.52
UBE3B-201ENST00000340074 ATG12O94817 140 aa11.77□□□□□ -0.52
UBE3B-201ENST00000340074 CDS2O95674 445 aa11.77□□□□□ -0.52
UBE3B-201ENST00000340074 OR8U8P0C7N1 319 aa11.77□□□□□ -0.52
UBE3B-201ENST00000340074 P0C879 139 aa11.77□□□□□ -0.52
UBE3B-201ENST00000340074 IL7P13232 177 aa11.77□□□□□ -0.52
UBE3B-201ENST00000340074 AKR1C4P17516 323 aa11.77□□□□□ -0.52
UBE3B-201ENST00000340074 LINC00299Q6ZSB3 139 aa11.77□□□□□ -0.52
UBE3B-201ENST00000340074 LHFPL5Q8TAF8 219 aa11.77□□□□□ -0.52
UBE3B-201ENST00000340074 SRSF8Q9BRL6 282 aaKnown RBP11.77□□□□□ -0.52
UBE3B-201ENST00000340074 HINT2Q9BX68 163 aa11.77□□□□□ -0.52
UBE3B-201ENST00000340074 FAM223BA6NKX1 122 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 LINC01619G3V211 115 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 OR2J3O76001 311 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 HSPB1P04792 205 aaKnown RBP11.77□□□□□ -0.53
UBE3B-201ENST00000340074 DEFA4P12838 97 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 CCR6P51684 374 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 SLURP1P55000 103 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 SUPT4H1P63272 117 aaKnown RBP11.77□□□□□ -0.53
UBE3B-201ENST00000340074 DHODHQ02127 395 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 WT1-ASQ06250 92 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 THOC7Q6I9Y2 204 aaKnown RBP11.77□□□□□ -0.53
UBE3B-201ENST00000340074 TMED4Q7Z7H5 227 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 FAM223AQ8IWN6 122 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 OR5B3Q8NH48 314 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 FANCD2OSQ96PS1 177 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 SLC25A21Q9BQT8 299 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-201ENST00000340074 PTTG2Q9NZH5 202 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 KCNIP3Q9Y2W7 256 aa11.77□□□□□ -0.53
UBE3B-201ENST00000340074 A0A0G2JRQ6 117 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 ANKRD34BA5PLL1 514 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 NAP1L6A6NFF2 107 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 DUS4LO95620 317 aaKnown RBP11.76□□□□□ -0.53
UBE3B-201ENST00000340074 DHFRP00374 187 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 OR13C7P0DN81 318 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 ATP5G2Q06055 141 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 TMEM187Q14656 261 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 RBMS2Q15434 407 aaKnown RBP11.76□□□□□ -0.53
UBE3B-201ENST00000340074 BEAN1Q3B7T3 259 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 ZNF343Q6P1L6 599 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 SELENOHQ8IZQ5 122 aaKnown RBP11.76□□□□□ -0.53
UBE3B-201ENST00000340074 NECAP1Q8NC96 275 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
UBE3B-201ENST00000340074 RBPMSQ93062 196 aaKnown RBP11.76□□□□□ -0.53
UBE3B-201ENST00000340074 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
UBE3B-201ENST00000340074 RRNAD1Q96FB5 475 aaKnown RBP11.76□□□□□ -0.53
UBE3B-201ENST00000340074 GALNT14Q96FL9 552 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-201ENST00000340074 PRR13Q9NZ81 148 aa11.76□□□□□ -0.53
UBE3B-201ENST00000340074 A0A0B4J293 547 aa11.75□□□□□ -0.53
UBE3B-201ENST00000340074 DEFA6Q01524 100 aa11.75□□□□□ -0.53
UBE3B-201ENST00000340074 EXOSC2Q13868 293 aaKnown RBP11.75□□□□□ -0.53
UBE3B-201ENST00000340074 C15orf32Q32M92 178 aa11.75□□□□□ -0.53
UBE3B-201ENST00000340074 TMEM268Q5VZI3 342 aa11.75□□□□□ -0.53
UBE3B-201ENST00000340074 HSD17B13Q7Z5P4 300 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-201ENST00000340074 S100ZQ8WXG8 99 aa11.75□□□□□ -0.53
UBE3B-201ENST00000340074 DCUN1D4Q92564 292 aa11.75□□□□□ -0.53
UBE3B-201ENST00000340074 TMEM56Q96MV1 263 aa11.75□□□□□ -0.53
UBE3B-201ENST00000340074 FBXL7Q9UJT9 491 aa11.75□□□□□ -0.53
UBE3B-201ENST00000340074 TMEM56-RWDD3S4R434 201 aa11.75□□□□□ -0.53
UBE3B-201ENST00000340074 IGLV11-55A0A075B6I3 123 aa11.74□□□□□ -0.53
UBE3B-201ENST00000340074 TRBV12-3P01733 135 aa11.74□□□□□ -0.53
UBE3B-201ENST00000340074 HIST1H1BP16401 226 aaKnown RBP11.74□□□□□ -0.53
UBE3B-201ENST00000340074 MECP2P51608 486 aaKnown RBP11.74□□□□□ -0.53
UBE3B-201ENST00000340074 HSPE1P61604 102 aaKnown RBP11.74□□□□□ -0.53
UBE3B-201ENST00000340074 KLK9Q2XQG4 91 aa11.74□□□□□ -0.53
UBE3B-201ENST00000340074 TMEM128Q5BJH2 165 aa11.74□□□□□ -0.53
UBE3B-201ENST00000340074 KPRPQ5T749 579 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-201ENST00000340074 ZNF429Q86V71 674 aa11.74□□□□□ -0.53
UBE3B-201ENST00000340074 DLX4Q92988 240 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-201ENST00000340074 MCRIP2Q9BUT9 160 aaKnown RBP11.74□□□□□ -0.53
UBE3B-201ENST00000340074 PEF1Q9UBV8 284 aaKnown RBP11.74□□□□□ -0.53
UBE3B-201ENST00000340074 KLK9Q9UKQ9 250 aa11.74□□□□□ -0.53
UBE3B-201ENST00000340074 DMRT1Q9Y5R6 373 aa11.74□□□□□ -0.53
UBE3B-201ENST00000340074 CENPXA8MT69 81 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 ST8SIA3O43173 380 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 NDUFB8O95169 186 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 ANXA3P12429 323 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 HOXD3P31249 432 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-201ENST00000340074 BTCP35070 178 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 PRCDQ00LT1 54 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 SPINK9Q5DT21 86 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 Q6ZRM9 215 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 FAM219AQ8IW50 185 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms