RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 CTRB1P17538 263 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 ZP3P21754 424 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 INPP1P49441 399 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 KLF9Q13886 244 aaPredicted RBP10.82□□□□□ -0.68
LIMS1-201ENST00000332345 TRIM16LQ309B1 348 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 FAM209BQ5JX69 171 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 FOXB2Q5VYV0 432 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 CTRB2Q6GPI1 263 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 ZNF343Q6P1L6 599 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 OR5B3Q8NH48 314 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 TRIM63Q969Q1 353 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 TMEM56Q96MV1 263 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 C5orf66Q9H5L9 145 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 AKIP1Q9NQ31 210 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 NDUFA4L2Q9NRX3 87 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 PEF1Q9UBV8 284 aaKnown RBP10.82□□□□□ -0.68
LIMS1-201ENST00000332345 KCNIP3Q9Y2W7 256 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 NSG2Q9Y328 171 aa10.82□□□□□ -0.68
LIMS1-201ENST00000332345 IGHV4OR15-8A0A075B7B6 117 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 A0A087WW49 117 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 CGB1A6NKQ9 187 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 OVOL1O14753 267 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 RBMXL2O75526 392 aaKnown RBP10.81□□□□□ -0.68
LIMS1-201ENST00000332345 UCP1P25874 307 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 DHODHQ02127 395 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 ZNF45Q02386 682 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 SP6Q3SY56 376 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 C9orf66Q5T8R8 295 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 ZNF57Q68EA5 555 aaPredicted RBP10.81□□□□□ -0.68
LIMS1-201ENST00000332345 REC114Q7Z4M0 266 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 SGPP2Q8IWX5 399 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 DCUN1D4Q92564 292 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 RRNAD1Q96FB5 475 aaKnown RBP10.81□□□□□ -0.68
LIMS1-201ENST00000332345 HINT2Q9BX68 163 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 SRRQ9GZT4 340 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 NAA60Q9H7X0 242 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 TMEM14BQ9NUH8 114 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 FBXL7Q9UJT9 491 aa10.81□□□□□ -0.68
LIMS1-201ENST00000332345 IGLC7A0M8Q6 106 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 CRYM-AS1A6NIL9 109 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 C15orf61A6NNL5 157 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 SEC14L6B5MCN3 397 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 OR2J3O76001 311 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 CDS2O95674 445 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 REG1AP05451 166 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 INSL3P51460 131 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 AKR1C2P52895 323 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 SLURP1P55000 103 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 TATDN3Q17R31 274 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 KLK9Q2XQG4 91 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 C15orf32Q32M92 178 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 TRIQKQ629K1 86 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 OR10W1Q8NGF6 305 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 DLX4Q92988 240 aaPredicted RBP10.8□□□□□ -0.68
LIMS1-201ENST00000332345 LSM10Q969L4 123 aaKnown RBP10.8□□□□□ -0.68
LIMS1-201ENST00000332345 FANCD2OSQ96PS1 177 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 TMEM222Q9H0R3 208 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 THYN1Q9P016 225 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 KLK9Q9UKQ9 250 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 MEGF8Q7Z7M0 2845 aa10.8□□□□□ -0.68
LIMS1-201ENST00000332345 OR5AC1P0C628 307 aa10.79□□□□□ -0.68
LIMS1-201ENST00000332345 OR13C7P0DN81 318 aa10.79□□□□□ -0.68
LIMS1-201ENST00000332345 MECP2P51608 486 aaKnown RBP10.79□□□□□ -0.68
LIMS1-201ENST00000332345 DEFA5Q01523 94 aa10.79□□□□□ -0.68
LIMS1-201ENST00000332345 RNASE11Q8TAA1 199 aaKnown RBP10.79□□□□□ -0.68
LIMS1-201ENST00000332345 GLYATL2Q8WU03 294 aa10.79□□□□□ -0.68
LIMS1-201ENST00000332345 SLC25A21Q9BQT8 299 aaPredicted RBP10.79□□□□□ -0.68
LIMS1-201ENST00000332345 A6NHS1 94 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 WIPF1O43516 503 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 NDUFB8O95169 186 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 IGKV1-5P01602 117 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 AKR1C4P17516 323 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 HOXD3P31249 432 aaPredicted RBP10.78□□□□□ -0.68
LIMS1-201ENST00000332345 HSPE1P61604 102 aaKnown RBP10.78□□□□□ -0.68
LIMS1-201ENST00000332345 EGFEM1PQ0D2K5 195 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 EXOSC2Q13868 293 aaKnown RBP10.78□□□□□ -0.68
LIMS1-201ENST00000332345 BAK1Q16611 211 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 PDLIM3Q53GG5 364 aaPredicted RBP10.78□□□□□ -0.68
LIMS1-201ENST00000332345 ZNF429Q86V71 674 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 FAM219AQ8IW50 185 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 OR1L6Q8NGR2 347 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 EEF1AKMT3Q96AZ1 226 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 GALNT14Q96FL9 552 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 CXorf58Q96LI9 332 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 ELOVL1Q9BW60 279 aa10.78□□□□□ -0.68
LIMS1-201ENST00000332345 IGLV11-55A0A075B6I3 123 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.77□□□□□ -0.69
LIMS1-201ENST00000332345 TRBV7-1A0A0A6YYK4 115 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 PIGBOS1A0A0B4J2F0 54 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 NAP1L6A6NFF2 107 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 DBX1A6NMT0 343 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 CENPXA8MT69 81 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 PRB2P02812 416 aaPredicted RBP10.77□□□□□ -0.69
LIMS1-201ENST00000332345 ANXA3P12429 323 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 ERHP84090 104 aaKnown RBP10.77□□□□□ -0.69
LIMS1-201ENST00000332345 WT1-ASQ06250 92 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 KLF5Q13887 457 aaPredicted RBP10.77□□□□□ -0.69
LIMS1-201ENST00000332345 RPEL1Q2QD12 228 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 SLC25A24Q6NUK1 477 aa10.77□□□□□ -0.69
LIMS1-201ENST00000332345 C19orf35Q6ZS72 473 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms