RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 DUSP23Q9BVJ7 150 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 YAE1D1Q9NRH1 226 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 SYS1-DBNDD2H3BUS1 97 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 RER1O15258 196 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 CLDN14O95500 239 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 CD27P26842 260 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 INSL3P51460 131 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 FAM120AOSQ5T036 256 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 Q6ZPA2 131 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 Q6ZRM9 215 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 ZNF257Q9Y2Q1 563 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 TIMM9Q9Y5J7 89 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 FREM2Q5SZK8 3169 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 HELTA6NFD8 242 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 H0Y8G0 127 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 AMY1AP04745 511 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 SPINK8P0C7L1 97 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 CD38P28907 300 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 C8orf86Q6ZUL3 223 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 OR10X1Q8NGY0 326 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 PIGTQ969N2 578 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 NDFIP1Q9BT67 221 aa9.88□□□□□ -0.83
SHMT2-201ENST00000328923 MRPS17Q9Y2R5 130 aaKnown RBP9.88□□□□□ -0.83
SHMT2-201ENST00000328923 KBTBD11-OT1A0A1B0GTJ5 212 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 A0A1W2PR77 199 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 SYNGR2O43760 224 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 HLA-DQA1P01909 254 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 OR10D3Q8NH80 312 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 PMCHL2Q9BQD1 86 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 WNT16Q9UBV4 365 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 HSPB8Q9UJY1 196 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 PIGBOS1A0A0B4J2F0 54 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 C5orf63A6NC05 138 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 CRXO43186 299 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-201ENST00000328923 COX5AP20674 150 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 FCGR2BP31994 310 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-201ENST00000328923 REG1BP48304 166 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 GNG4P50150 75 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 TFF3Q07654 80 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 FXYD3Q14802 87 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 ZNF585BQ52M93 769 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-201ENST00000328923 DHRS13Q6UX07 377 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 SPACA3Q8IXA5 215 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 DDB2Q92466 427 aa9.87□□□□□ -0.83
SHMT2-201ENST00000328923 ZFHX2Q9C0A1 2572 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-201ENST00000328923 B9A039 149 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 E9PLN8 166 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 COX8AP10176 69 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 CDAP32320 146 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 FASLGP48023 281 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 TMPRSS3P57727 454 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 RPL8P62917 257 aaKnown RBP9.86□□□□□ -0.83
SHMT2-201ENST00000328923 ZXDAP98168 799 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 RNPS1Q15287 305 aaKnown RBP9.86□□□□□ -0.83
SHMT2-201ENST00000328923 ZNF611Q8N823 705 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 ANAPC13Q9BS18 74 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 TMEM191AQ9H0A3 160 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 SH2D2AQ9NP31 389 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 PIGLQ9Y2B2 252 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 EXPH5Q8NEV8 1989 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 ANGPTL7O43827 346 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 MT-ATP8P03928 68 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 MFAP5Q13361 173 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 ETDBQ3ZM63 59 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 GCSAMLQ5JQS6 135 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 SAMD5Q5TGI4 173 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 TMEM211Q6ICI0 200 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 OR2D2Q9H210 308 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 CACNG5Q9UF02 275 aa9.86□□□□□ -0.83
SHMT2-201ENST00000328923 CEP192Q8TEP8 1941 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 TRAV38-1A0A0B4J264 116 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 IGKV1D-13A0A0B4J2D9 117 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 IGKV1-13P0DP09 117 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 VWC2Q2TAL6 325 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 SLC25A53Q5H9E4 307 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 Q6ZS49 121 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 SPEM1Q8N4L4 309 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 PRSS33Q8NF86 280 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 OR52E5Q8NH55 327 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 OR1L1Q8NH94 360 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 ARPC1AQ92747 370 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 C20orf78Q9BR46 151 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 RNASE7Q9H1E1 156 aaKnown RBP9.85□□□□□ -0.83
SHMT2-201ENST00000328923 RABAC1Q9UI14 185 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 THADAQ6YHU6 1953 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 CELSR3Q9NYQ7 3312 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 hCG_38984A0A1B0GV85 526 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 SRSF6Q13247 344 aaKnown RBP9.85□□□□□ -0.83
SHMT2-201ENST00000328923 PDCD1Q15116 288 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 CEACAM16Q2WEN9 425 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 COX19Q49B96 90 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 SSX8Q7RTT4 187 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 WDR5BQ86VZ2 330 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 C5orf30Q96GV9 206 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 URB1-AS1Q96HZ7 61 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 NUDT22Q9BRQ3 303 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 R4GN57 208 aa9.85□□□□□ -0.83
SHMT2-201ENST00000328923 ABCA7Q8IZY2 2146 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms