RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 COMMD5Q9GZQ3 224 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 AURKAIP1Q9NWT8 199 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-201ENST00000311943 FBXL7Q9UJT9 491 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 TEX13DA0A0J9YY54 714 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-201ENST00000311943 P0C879 139 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 BTCP35070 178 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 ERVK-16P61578 105 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 DPF1Q92782 380 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 CCDC140Q96MF4 163 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 SLA2Q9H6Q3 261 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 NAA60Q9H7X0 242 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 NDUFA4L2Q9NRX3 87 aa9.24□□□□□ -0.93
SCFD1-201ENST00000311943 CRYM-AS1A6NIL9 109 aa9.23□□□□□ -0.93
SCFD1-201ENST00000311943 LINC01619G3V211 115 aa9.23□□□□□ -0.93
SCFD1-201ENST00000311943 UCP1P25874 307 aa9.23□□□□□ -0.93
SCFD1-201ENST00000311943 RUNX1Q01196 453 aa9.23□□□□□ -0.93
SCFD1-201ENST00000311943 KPRPQ5T749 579 aaPredicted RBP9.23□□□□□ -0.93
SCFD1-201ENST00000311943 ZNF343Q6P1L6 599 aa9.23□□□□□ -0.93
SCFD1-201ENST00000311943 H2BFWTQ7Z2G1 175 aa9.23□□□□□ -0.93
SCFD1-201ENST00000311943 SELENOHQ8IZQ5 122 aaKnown RBP9.23□□□□□ -0.93
SCFD1-201ENST00000311943 BORCS5Q969J3 196 aa9.23□□□□□ -0.93
SCFD1-201ENST00000311943 TMEM14BQ9NUH8 114 aa9.23□□□□□ -0.93
SCFD1-201ENST00000311943 SLC2A8Q9NY64 477 aa9.23□□□□□ -0.93
SCFD1-201ENST00000311943 IGLV11-55A0A075B6I3 123 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 C13orf42A0A1B0GVH6 325 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 C15orf61A6NNL5 157 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 SEC14L6B5MCN3 397 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 BMPR1BO00238 502 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 PLA2G10O15496 165 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 CRYGCP07315 174 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 IL7P13232 177 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 PTBP1P26599 531 aaKnown RBP eCLIP9.22□□□□□ -0.93
SCFD1-201ENST00000311943 CD40LGP29965 261 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 AKR1C2P52895 323 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 SYNJ2BPP57105 145 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 EXOSC2Q13868 293 aaKnown RBP9.22□□□□□ -0.93
SCFD1-201ENST00000311943 TMEM268Q5VZI3 342 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 CLEC19AQ6UXS0 136 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 OR4A5Q8NH83 315 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 ZFAND1Q8TCF1 268 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 ZNF486Q96H40 463 aaPredicted RBP9.22□□□□□ -0.93
SCFD1-201ENST00000311943 PRRT1Q99946 306 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 C14orf166Q9Y224 244 aaKnown RBP9.22□□□□□ -0.93
SCFD1-201ENST00000311943 NPIPB5A8MRT5 1133 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 HSPB1P04792 205 aaKnown RBP9.22□□□□□ -0.93
SCFD1-201ENST00000311943 TRAPPC2P0DI81 140 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 TRAPPC2BP0DI82 140 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 LYZL2Q7Z4W2 148 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 GDPD1Q8N9F7 314 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 GPR146Q96CH1 333 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 PRR25Q96S07 402 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 TMEM222Q9H0R3 208 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 NDUFA13Q9P0J0 144 aa9.22□□□□□ -0.93
SCFD1-201ENST00000311943 IGHV3OR16-8A0A075B7F1 116 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 K7EIL1 84 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 OVOL1O14753 267 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 ST8SIA3O43173 380 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 SNAPC5O75971 98 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 OR2C1O95371 312 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 CDS2O95674 445 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 DEFA4P12838 97 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 MAS1LP35410 378 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 TMEM187Q14656 261 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 MLANAQ16655 118 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 ANKRD55Q3KP44 614 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 IL34Q6ZMJ4 242 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 SLC35G3Q8N808 338 aa9.21□□□□□ -0.93
SCFD1-201ENST00000311943 RCC1LQ96I51 464 aaKnown RBP9.21□□□□□ -0.93
SCFD1-201ENST00000311943 PEF1Q9UBV8 284 aaKnown RBP9.21□□□□□ -0.93
SCFD1-201ENST00000311943 CREBL2O60519 120 aaPredicted RBP9.21□□□□□ -0.94
SCFD1-201ENST00000311943 ATP5G2Q06055 141 aa9.21□□□□□ -0.94
SCFD1-201ENST00000311943 SLC25A24Q6NUK1 477 aa9.21□□□□□ -0.94
SCFD1-201ENST00000311943 ADAMTSL5Q6ZMM2 481 aa9.21□□□□□ -0.94
SCFD1-201ENST00000311943 OR1L8Q8NGR8 309 aa9.21□□□□□ -0.94
SCFD1-201ENST00000311943 SCP2D1Q9UJQ7 156 aa9.21□□□□□ -0.94
SCFD1-201ENST00000311943 ZNF257Q9Y2Q1 563 aa9.21□□□□□ -0.94
SCFD1-201ENST00000311943 F8W735 103 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-201ENST00000311943 H3BUA1 57 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 OR8U8P0C7N1 319 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 S100GP29377 79 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 UBE2MP61081 183 aaKnown RBP9.2□□□□□ -0.94
SCFD1-201ENST00000311943 IFITM3Q01628 133 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 PPP1R1AQ13522 171 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 PDLIM3Q53GG5 364 aaPredicted RBP9.2□□□□□ -0.94
SCFD1-201ENST00000311943 CCDC71LQ8N9Z2 235 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 NECAP1Q8NC96 275 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 OR4A16Q8NH70 328 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 CACNG8Q8WXS5 425 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 ZNF414Q96IQ9 312 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 TMEM68Q96MH6 324 aa9.2□□□□□ -0.94
SCFD1-201ENST00000311943 SAP30O75446 220 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 SLC6A1P30531 599 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 MECP2P51608 486 aaKnown RBP9.19□□□□□ -0.94
SCFD1-201ENST00000311943 KLF5Q13887 457 aaPredicted RBP9.19□□□□□ -0.94
SCFD1-201ENST00000311943 SURF2Q15527 256 aaPredicted RBP9.19□□□□□ -0.94
SCFD1-201ENST00000311943 TRIQKQ629K1 86 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 UNQ9165/PRO28630Q6UXU0 137 aa9.19□□□□□ -0.94
SCFD1-201ENST00000311943 RANGRFQ9HD47 186 aaPredicted RBP9.19□□□□□ -0.94
SCFD1-201ENST00000311943 MRPL36Q9P0J6 103 aaKnown RBP9.19□□□□□ -0.94
SCFD1-201ENST00000311943 RABL2AQ9UBK7 228 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms