RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FAM223BA6NKX1 122 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CCL24O00175 119 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 LYRM1O43325 122 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 NDUFB6O95139 128 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CDS2O95674 445 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 IGKV1-5P01602 117 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 IGHV3-11P01762 117 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 REG1AP05451 166 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 PSMB6P28072 239 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 FAM223AQ8IWN6 122 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 LGI3Q8N145 548 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 SLC35G3Q8N808 338 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR11H1Q8NG94 326 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 GLYATL2Q8WU03 294 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 IL22RA2Q969J5 263 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 USMG5Q96IX5 58 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TMEM14BQ9NUH8 114 aa8.55□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 IGLC7A0M8Q6 106 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CGB1A6NKQ9 187 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 E7EUB6 86 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 BRI3O95415 125 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 PRH1P02810 166 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR8U8P0C7N1 319 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 AREGP15514 252 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 HIST1H1BP16401 226 aaKnown RBP8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CTRB1P17538 263 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 UBE2MP61081 183 aaKnown RBP8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 RHOGP84095 191 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 RUNX1Q01196 453 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 DEFA5Q01523 94 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ZNF616Q08AN1 781 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TMEM187Q14656 261 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CTRB2Q6GPI1 263 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 MZT2BQ6NZ67 158 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ETV3LQ6ZN32 361 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 SELENOHQ8IZQ5 122 aaKnown RBP8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 RAX2Q96IS3 184 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 DUX3Q96PT4 197 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 PLEKHA3Q9HB20 300 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ENY2Q9NPA8 101 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 THYN1Q9P016 225 aa8.54□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 A0A1B0GW64 132 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 LINC01619G3V211 115 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 I3L521 148 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR2J3O76001 311 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 SFT2D2O95562 160 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 IFNA17P01571 189 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 CRYGCP07315 174 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR13C7P0DN81 318 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 HOXA1P49639 335 aaPredicted RBP8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 SUPT4H1P63272 117 aaKnown RBP8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 PRCDQ00LT1 54 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ATP5G2Q06055 141 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 EXOSC2Q13868 293 aaKnown RBP8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 KIAA0141Q14154 515 aaPredicted RBP8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 IZUMO4Q1ZYL8 232 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 FAM209BQ5JX69 171 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ZNF429Q86V71 674 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 LINC00482Q8N8I6 264 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 NECAP1Q8NC96 275 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR10W1Q8NGF6 305 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 OR1N2Q8NGR9 330 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 LHFPL5Q8TAF8 219 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 P2RX4Q99571 388 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 GPR61Q9BZJ8 451 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 ALX4Q9H161 411 aaPredicted RBP8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 C20orf85Q9H1P6 137 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 NDUFA4L2Q9NRX3 87 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 PRR13Q9NZ81 148 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 FBXL7Q9UJT9 491 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TMEM56-RWDD3S4R434 201 aa8.53□□□□□ -1.04
CSPG4P1Y-201ENST00000306641 TRBV9A0A0B4J1U6 114 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 A0A0B4J2A0 478 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 DUXBA0A1W2PPF3 345 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 DBX1A6NMT0 343 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ST8SIA3O43173 380 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 UPK1BO75841 260 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 DUS4LO95620 317 aaKnown RBP8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 HLA-AP01891 365 aaKnown RBP8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 HSPB1P04792 205 aaKnown RBP8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 P0C879 139 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 BTCP35070 178 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 HSPE1P61604 102 aaKnown RBP8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ERHP84090 104 aaKnown RBP8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 PPP1R1AQ13522 171 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 C15orf32Q32M92 178 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 C4orf46Q504U0 113 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 OR1L6Q8NGR2 347 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 EEF1AKMT3Q96AZ1 226 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 RCC1LQ96I51 464 aaKnown RBP8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 MCRIP2Q9BUT9 160 aaKnown RBP8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 RANGRFQ9HD47 186 aaPredicted RBP8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 CACNG5Q9UF02 275 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 CACFD1Q9UGQ2 172 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 SHPKQ9UHJ6 478 aa8.52□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 IGHV4OR15-8A0A075B7B6 117 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 A0A087WW49 117 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 A0A0G2JRQ6 117 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 FAM240BA0A1B0GVZ2 78 aa8.51□□□□□ -1.05
CSPG4P1Y-201ENST00000306641 ANKRD34BA5PLL1 514 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms