RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 HSPB6O14558 160 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 IFNA5P01569 189 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 CFIP05156 583 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 RPLP1P05386 114 aaKnown RBP4.44□□□□□ -1.7
VPS50-202ENST00000305866 ARL14EPLP0DKL9 152 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 ZNF25P17030 456 aaPredicted RBP4.44□□□□□ -1.7
VPS50-202ENST00000305866 CHRNA7P36544 502 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 CEBPDP49716 269 aaPredicted RBP4.44□□□□□ -1.7
VPS50-202ENST00000305866 ZNF137PP52743 207 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 PAFAH1B2P68402 229 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 EFNB3Q15768 340 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 SEM1Q6ZVN7 128 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 CD177Q8N6Q3 437 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 C22orf46C9J442 243 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 F6UZH7 168 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 SLC17A3O00476 420 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 OR2J3O76001 311 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 CLEC12BQ2HXU8 276 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 SPANXN5Q5MJ07 72 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 Q6ZVH6 145 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 MUC15Q8N387 334 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 GCSAMQ8N6F7 178 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 NUP37Q8NFH4 326 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 OR52L2PQ8NGH6 319 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 OR4F5Q8NH21 305 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 TSKUQ8WUA8 353 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 ORAOV1Q8WV07 137 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 GALMQ96C23 342 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 JKAMPQ9P055 326 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 SLC25A10Q9UBX3 287 aaPredicted RBP4.44□□□□□ -1.7
VPS50-202ENST00000305866 PPP1R3CQ9UQK1 317 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 MYO9BQ13459 2157 aa4.44□□□□□ -1.7
VPS50-202ENST00000305866 IGKV1D-37A0A075B6S9 117 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 IFNA1P01562 189 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 SERPINE2P07093 398 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 MPV17P39210 176 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 TFPI2P48307 235 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 CEBPGP53567 150 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 SLAQ13239 276 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 SLC25A40Q8TBP6 338 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 DTD1Q8TEA8 209 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 MLST8Q9BVC4 326 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 MRPL18Q9H0U6 180 aaKnown RBP4.43□□□□□ -1.7
VPS50-202ENST00000305866 GOLT1BQ9Y3E0 138 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 KNL1Q8NG31 2342 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 A0A096LPE4 126 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 IGHV1-18A0A0C4DH31 117 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 IGHV2-70DA0A0C4DH43 119 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 A0A1W2PPZ6 126 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 TM4SF5O14894 197 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 TRAPPC6AO75865 159 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 HBZP02008 142 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 G0S2P27469 103 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 CDKN1BP46527 198 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 TGFBR3Q03167 851 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 C17orf58Q2M2W7 97 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 OR13A1Q8NGR1 328 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 PRSS22Q9GZN4 317 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 TRAPPC1Q9Y5R8 145 aa4.43□□□□□ -1.7
VPS50-202ENST00000305866 IGKV1D-17A0A075B6S4 117 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 IGHV2OR16-5A0A0B4J2B6 119 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 DLL1O00548 723 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 WNT9BO14905 357 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 PPBPP02775 128 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 C3orf79P0CE67 100 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 CEACAM8P31997 349 aaPredicted RBP4.42□□□□□ -1.7
VPS50-202ENST00000305866 PRRX1P54821 245 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 RHOBP62745 196 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 CATR1Q13166 79 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 MMDQ15546 238 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 ASPHD1Q5U4P2 390 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 LRP11Q86VZ4 500 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 SPACA3Q8IXA5 215 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 C18orf32Q8TCD1 76 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 STARD4Q96DR4 205 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 C19orf24Q9BVV8 132 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 SLC25A2Q9BXI2 301 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 OPN3Q9H1Y3 402 aaPredicted RBP4.42□□□□□ -1.7
VPS50-202ENST00000305866 HEYLQ9NQ87 328 aaPredicted RBP4.42□□□□□ -1.7
VPS50-202ENST00000305866 COLQQ9Y215 455 aaPredicted RBP4.42□□□□□ -1.7
VPS50-202ENST00000305866 MRPS16Q9Y3D3 137 aaKnown RBP4.42□□□□□ -1.7
VPS50-202ENST00000305866 TRBV9A0A0B4J1U6 114 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 M0R296 226 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 AGFG2O95081 481 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 RPL29P47914 159 aaKnown RBP4.42□□□□□ -1.7
VPS50-202ENST00000305866 CDC34P49427 236 aaPredicted RBP4.42□□□□□ -1.7
VPS50-202ENST00000305866 TMEM164Q5U3C3 297 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 DMRTA1Q5VZB9 504 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 STUMQ69YW2 141 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 LINC00322Q6ZN03 302 aaPredicted RBP4.42□□□□□ -1.7
VPS50-202ENST00000305866 LINC00311Q8N616 119 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 KCNS1Q96KK3 526 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 SLC39A9Q9NUM3 307 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 IL17BQ9UHF5 180 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.42□□□□□ -1.7
VPS50-202ENST00000305866 CA2P00918 260 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 FGF6P10767 208 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 GCHFRP30047 84 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 KLK9Q2XQG4 91 aa4.42□□□□□ -1.7
VPS50-202ENST00000305866 FAM231DQ6ZW35 169 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms