RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 A8MWV9 139 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 LY6EQ16553 131 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 COX14Q96I36 57 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 SEPSECSQ9HD40 501 aaKnown RBP7.48□□□□□ -1.21
NIPBL-201ENST00000282516 TSPAN7P41732 249 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 PGFP49763 221 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 UNC119Q13432 240 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 C14orf144Q96I85 54 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 JPT1Q9UK76 154 aa7.48□□□□□ -1.21
NIPBL-201ENST00000282516 PRR32B1ATL7 298 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 PGLYRP1O75594 196 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-201ENST00000282516 IGKV3-20P01619 116 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 TBR1Q16650 682 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 WNK3Q9BYP7 1800 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 FHITP49789 147 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 FAM89BQ8N5H3 189 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 ST6GALNAC3Q8NDV1 305 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 SSBP3Q9BWW4 388 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-201ENST00000282516 IL6RP08887 468 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-201ENST00000282516 PRDM13Q9H4Q3 707 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 M0R2P5 195 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 C9orf40Q8IXQ3 194 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 LOC285556D6RIA3 1793 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 IGHV5-10-1A0A0J9YXX1 117 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 H3BTX0 84 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 FOXH1O75593 365 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 FGFRL1Q8N441 504 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 TMEM190Q8WZ59 177 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 MEGF9Q9H1U4 602 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 PLXNB1O43157 2135 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 IGHV1OR15-9A0A0B4J2B8 117 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 NAPSAO96009 420 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 MOSP00540 346 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 ZNF660Q6AZW8 331 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-201ENST00000282516 A0A1W2PPC1 479 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 TMEM238C9JI98 176 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 DPM2O94777 84 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 FAM214BQ7L5A3 538 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 P2RY4P51582 365 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 CYP2G1PQ6ZSU1 146 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 LINC00518Q8N0U6 118 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 JPT2Q9H910 190 aa7.47□□□□□ -1.21
NIPBL-201ENST00000282516 ARID2Q68CP9 1835 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 PLA2G10O15496 165 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 HOXB1P14653 301 aaPredicted RBP7.46□□□□□ -1.21
NIPBL-201ENST00000282516 MYOD1P15172 320 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 NABP2Q9BQ15 211 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 PTPRDP23468 1912 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 H3BUT2 72 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 ASCL2Q99929 193 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 ST20Q9HBF5 79 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 PEMTQ9UBM1 199 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 GPR132Q9UNW8 380 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 SCTP09683 121 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 ORMDL2Q53FV1 153 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 IL36BQ9NZH7 164 aa7.46□□□□□ -1.21
NIPBL-201ENST00000282516 LDLRAD4O15165 306 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 LINC00614P0C842 121 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 HTN3P15516 51 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 GAGE2BQ13066 116 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 ZNF79Q15937 498 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 XIRP1Q702N8 1843 aaKnown RBP7.46□□□□□ -1.22
NIPBL-201ENST00000282516 PRSS23O95084 383 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 LINC01559Q495D7 138 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 IZUMO1RA6ND01 250 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 AHRRA9YTQ3 701 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 TDGF1P3P51864 188 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 TEX45Q8NA69 505 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 FER1L6-AS1Q8NA97 138 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 OR4D11Q8NGI4 311 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.22
NIPBL-201ENST00000282516 GDF15Q99988 308 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.46□□□□□ -1.22
NIPBL-201ENST00000282516 WNT2BQ93097 391 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 NHP2Q9NX24 153 aaKnown RBP7.46□□□□□ -1.22
NIPBL-201ENST00000282516 CD8AP01732 235 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 CD28P10747 220 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 FOXA3P55318 350 aaPredicted RBP7.46□□□□□ -1.22
NIPBL-201ENST00000282516 ST6GALNAC6Q969X2 333 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 VKORC1Q9BQB6 163 aa7.46□□□□□ -1.22
NIPBL-201ENST00000282516 OPN3Q9H1Y3 402 aaPredicted RBP7.46□□□□□ -1.22
NIPBL-201ENST00000282516 TET1Q8NFU7 2136 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 TOMM40O96008 361 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 PNKDQ8N490 385 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 TPRX1Q8N7U7 411 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 ZNF831Q5JPB2 1677 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 VWC2LB2RUY7 222 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 APCDD1LQ8NCL9 501 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 MYEOVQ96EZ4 313 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 FREM1Q5H8C1 2179 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 ABHD12Q8N2K0 398 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 SONP18583 2426 aaKnown RBP7.45□□□□□ -1.22
NIPBL-201ENST00000282516 ICAM4Q14773 271 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 EML6Q6ZMW3 1958 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 ZP4Q12836 540 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 SPANXA1Q9NS26 97 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 DOPEY1Q5JWR5 2465 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 UPK3AO75631 287 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 ARPC1AQ92747 370 aa7.45□□□□□ -1.22
NIPBL-201ENST00000282516 SEC11AP67812 179 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms