RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 NDUFS7O75251 213 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 PRB3Q04118 309 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 NMSQ5H8A3 153 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 MOB1BQ7L9L4 216 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 ZNF843Q8N446 348 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR5D13Q8NGL4 314 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 VN1R17PQ8TDU5 208 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 COQ2Q96H96 371 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 POLR3KQ9Y2Y1 108 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 TCF21O43680 179 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 SYNGR2O43760 224 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 KRASP01116 189 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 PFN1P07737 140 aaKnown RBP9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 RND2P52198 227 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 DAZAP2Q15038 168 aaPredicted RBP9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 ABHD14BQ96IU4 210 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 DERL1Q9BUN8 251 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR2D2Q9H210 308 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR2W1Q9Y3N9 320 aa9.68□□□□□ -0.86
TNFAIP1-201ENST00000226225 NAV2Q8IVL1 2488 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 CNN1P51911 297 aaKnown RBP9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 DPPA3Q6W0C5 159 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 RPP25LQ8N5L8 163 aaKnown RBP9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 NAGKQ9UJ70 344 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 IGKV1-6A0A0C4DH72 117 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 ACTR3CQ9C0K3 210 aaPredicted RBP9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 CLEC18AA5D8T8 446 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 GCGP01275 180 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 CLEC18CQ8NCF0 446 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 TMEM56Q96MV1 263 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR6C3Q9NZP0 311 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 CLN8Q9UBY8 286 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 TMEM56-RWDD3S4R434 201 aa9.67□□□□□ -0.86
TNFAIP1-201ENST00000226225 TMEM178BH3BS89 294 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 F2RP25116 425 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 ERVFC1-1P60608 527 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 SLC38A11Q08AI6 406 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 ZNF816Q0VGE8 651 aaPredicted RBP9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 ARSJQ5FYB0 599 aaPredicted RBP9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 LYPD2Q6UXB3 125 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 C11orf1Q9H5F2 150 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 YLPM1P49750 1951 aaKnown RBP9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 CSPG4Q6UVK1 2322 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 HPRT1P00492 218 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 HRASP01112 189 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 LBHQ53QV2 105 aaPredicted RBP9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 GCSAMLQ5JQS6 135 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 SLC35E4Q6ICL7 350 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 HAPLN4Q86UW8 402 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 ZNF525Q8N782 197 aa9.66□□□□□ -0.86
TNFAIP1-201ENST00000226225 HBG1P69891 147 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 HBG2P69892 147 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 FFAR4Q5NUL3 377 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR10G4Q8NGN3 311 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR10G9Q8NGN4 311 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 OR10G7Q8NGN6 311 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 DTD1Q8TEA8 209 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 FAM222BQ8WU58 562 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 RAB1CQ92928 201 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 SAMD10Q9BYL1 202 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 HES4Q9HCC6 221 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 A0A1B0GWJ7 208 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 RPLP1P05386 114 aaKnown RBP9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 COL8A1P27658 744 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 SLC35B1P78383 322 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 ACSM6Q6P461 480 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 MANBALQ9NQG1 85 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 hADV38S2A0JD32 116 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 KBTBD11O94819 623 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 CCL3L1P16619 93 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 UCP1P25874 307 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 IL3RAP26951 378 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 GATA4P43694 442 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 GPR12P47775 334 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 KRTDAPP60985 99 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 RAB4BP61018 213 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 TFF3Q07654 80 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 Q6ZVH6 145 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 ZNF295-AS1Q8N0V1 137 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 LPAR2Q9HBW0 351 aa9.65□□□□□ -0.86
TNFAIP1-201ENST00000226225 NDUFB4O95168 129 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 ERASQ7Z444 233 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 LYG1Q8N1E2 194 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 TMEM170AQ8WVE7 144 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 CTDSP1Q9GZU7 261 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 CALYQ9NYX4 217 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 CBLN1P23435 193 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 LINC00205P59089 165 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 PRR31Q5SQ13 230 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 CYP2G1PQ6ZSU1 146 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 SGMS2Q8NHU3 365 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 TAF15Q92804 592 aaKnown RBP eCLIP9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 HSPB9Q9BQS6 159 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 MARCH11A6NNE9 402 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 C11orf94C9JXX5 98 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 ATP5G3P48201 142 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 PRAMEF5Q5TYX0 476 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 KCNIP4Q6PIL6 250 aa9.64□□□□□ -0.87
TNFAIP1-201ENST00000226225 DYSFO75923 2080 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 A0A1W2PRD5 423 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms