RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ZNF257Q9Y2Q1 563 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 OR51B2Q9Y5P1 312 aa9.77□□□□□ -0.85
LSM5-201ENST00000223084 TEX13DA0A0J9YY54 714 aaPredicted RBP9.76□□□□□ -0.85
LSM5-201ENST00000223084 NDUFB8O95169 186 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 IGKV1-5P01602 117 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 CRYGCP07315 174 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 OR5AC1P0C628 307 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 TRAPPC2P0DI81 140 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 TRAPPC2BP0DI82 140 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 CTRB1P17538 263 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 ECI1P42126 302 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 KRTAP10-11P60412 298 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 ATP5G2Q06055 141 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 SURF2Q15527 256 aaPredicted RBP9.76□□□□□ -0.85
LSM5-201ENST00000223084 BAK1Q16611 211 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 TRIM16LQ309B1 348 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 CNPY1Q3B7I2 92 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 CTRB2Q6GPI1 263 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 ZNF343Q6P1L6 599 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 SDHCQ99643 169 aaPredicted RBP9.76□□□□□ -0.85
LSM5-201ENST00000223084 FBXL7Q9UJT9 491 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 PRNDQ9UKY0 176 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 S4R3C0 116 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 DNAH3Q8TD57 4116 aa9.76□□□□□ -0.85
LSM5-201ENST00000223084 FAM223BA6NKX1 122 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 C15orf61A6NNL5 157 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 SEC14L6B5MCN3 397 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 OVOL1O14753 267 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 IGHV3-23P01764 117 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 FGF2P09038 288 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 UCP1P25874 307 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 AP3S2P59780 193 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 EXOSC2Q13868 293 aaKnown RBP9.75□□□□□ -0.85
LSM5-201ENST00000223084 C15orf32Q32M92 178 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 PDLIM3Q53GG5 364 aaPredicted RBP9.75□□□□□ -0.85
LSM5-201ENST00000223084 ZNF57Q68EA5 555 aaPredicted RBP9.75□□□□□ -0.85
LSM5-201ENST00000223084 FAM223AQ8IWN6 122 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 CADM3Q8N126 398 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 GDPD1Q8N9F7 314 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 NECAP1Q8NC96 275 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 OR4A16Q8NH70 328 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 TMEM230Q96A57 120 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 TSC22D3Q99576 134 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 NAA60Q9H7X0 242 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 RANGRFQ9HD47 186 aaPredicted RBP9.75□□□□□ -0.85
LSM5-201ENST00000223084 NDUFA4L2Q9NRX3 87 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 TMEM14BQ9NUH8 114 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 AURKAIP1Q9NWT8 199 aaPredicted RBP9.75□□□□□ -0.85
LSM5-201ENST00000223084 PRR13Q9NZ81 148 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 PTTG2Q9NZH5 202 aa9.75□□□□□ -0.85
LSM5-201ENST00000223084 PEF1Q9UBV8 284 aaKnown RBP9.75□□□□□ -0.85
LSM5-201ENST00000223084 A0A0G2JRQ6 117 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 CRYM-AS1A6NIL9 109 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 P0C879 139 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 OR13C7P0DN81 318 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 DEFA4P12838 97 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 FAUP35544 74 aaKnown RBP9.74□□□□□ -0.85
LSM5-201ENST00000223084 AKR1C2P52895 323 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 WT1-ASQ06250 92 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 LHFPL5Q8TAF8 219 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 GLYATL2Q8WU03 294 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 GPR61Q9BZJ8 451 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 TMEM222Q9H0R3 208 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 DMRT1Q9Y5R6 373 aa9.74□□□□□ -0.85
LSM5-201ENST00000223084 IGLV11-55A0A075B6I3 123 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.73□□□□□ -0.85
LSM5-201ENST00000223084 LINC00854A0A1B0GVQ3 168 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 DHFRP00374 187 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 AKR1C4P17516 323 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 MECP2P51608 486 aaKnown RBP9.73□□□□□ -0.85
LSM5-201ENST00000223084 EGFEM1PQ0D2K5 195 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 KLK9Q2XQG4 91 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 SPINK9Q5DT21 86 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 C9orf66Q5T8R8 295 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 TRIQKQ629K1 86 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 SELENOHQ8IZQ5 122 aaKnown RBP9.73□□□□□ -0.85
LSM5-201ENST00000223084 OR5B3Q8NH48 314 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 LSM10Q969L4 123 aaKnown RBP9.73□□□□□ -0.85
LSM5-201ENST00000223084 SCGB3A2Q96PL1 93 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 SRSF8Q9BRL6 282 aaKnown RBP9.73□□□□□ -0.85
LSM5-201ENST00000223084 FKBP11Q9NYL4 201 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 KLK9Q9UKQ9 250 aa9.73□□□□□ -0.85
LSM5-201ENST00000223084 SORL1Q92673 2214 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 PRKDCP78527 4128 aaKnown RBP9.72□□□□□ -0.85
LSM5-201ENST00000223084 A0A0B4J293 547 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 PPP5D1E7EU14 171 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 BMPR1BO00238 502 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 B3GALNT1O75752 331 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 CDS2O95674 445 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 ZP3P21754 424 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 INPP1P49441 399 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 MFAP2P55001 183 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 SYNJ2BPP57105 145 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 DHODHQ02127 395 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 KLF5Q13887 457 aaPredicted RBP9.72□□□□□ -0.85
LSM5-201ENST00000223084 TMEM187Q14656 261 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 THOC7Q6I9Y2 204 aaKnown RBP9.72□□□□□ -0.85
LSM5-201ENST00000223084 SLC25A24Q6NUK1 477 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 Q6ZRM9 215 aa9.72□□□□□ -0.85
LSM5-201ENST00000223084 LINC00299Q6ZSB3 139 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms