RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 SSBP1Q04837 148 aaKnown RBP13.36□□□□□ -0.27
PHGDH-227ENST00000641811 SCGB2B2Q4G0G5 96 aa13.36□□□□□ -0.27
PHGDH-227ENST00000641811 TTC9CQ8N5M4 171 aa13.36□□□□□ -0.27
PHGDH-227ENST00000641811 OR4A5Q8NH83 315 aa13.36□□□□□ -0.27
PHGDH-227ENST00000641811 DLX4Q92988 240 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-227ENST00000641811 FABP12A6NFH5 140 aa13.35□□□□□ -0.27
PHGDH-227ENST00000641811 MARCH11A6NNE9 402 aa13.35□□□□□ -0.27
PHGDH-227ENST00000641811 BRI3O95415 125 aa13.35□□□□□ -0.27
PHGDH-227ENST00000641811 ZNF735P0CB33 412 aa13.35□□□□□ -0.27
PHGDH-227ENST00000641811 AREGP15514 252 aa13.35□□□□□ -0.27
PHGDH-227ENST00000641811 S100GP29377 79 aa13.35□□□□□ -0.27
PHGDH-227ENST00000641811 G6PCP35575 357 aa13.35□□□□□ -0.27
PHGDH-227ENST00000641811 TERB2Q8NHR7 220 aa13.35□□□□□ -0.27
PHGDH-227ENST00000641811 SLC2A9Q9NRM0 540 aa13.35□□□□□ -0.27
PHGDH-227ENST00000641811 RABL2AQ9UBK7 228 aaPredicted RBP13.35□□□□□ -0.27
PHGDH-227ENST00000641811 RABL2BQ9UNT1 228 aa13.35□□□□□ -0.27
PHGDH-227ENST00000641811 TGP01266 2768 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 A0A0G2JLM5 398 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 SEC14L6B5MCN3 397 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 GSTZ1O43708 216 aaPredicted RBP13.34□□□□□ -0.27
PHGDH-227ENST00000641811 HSPB1P04792 205 aaKnown RBP13.34□□□□□ -0.27
PHGDH-227ENST00000641811 REG1AP05451 166 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 OR2B8PP59922 312 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 ERVK-16P61578 105 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 RHOGP84095 191 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 EGFEM1PQ0D2K5 195 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 MARCH1Q8TCQ1 289 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 MRGPRFQ96AM1 343 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 GPR61Q9BZJ8 451 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 AKIP1Q9NQ31 210 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
PHGDH-227ENST00000641811 TRBV9A0A0B4J1U6 114 aa13.33□□□□□ -0.28
PHGDH-227ENST00000641811 DPPA5A6NC42 116 aa13.33□□□□□ -0.28
PHGDH-227ENST00000641811 OVOL1O14753 267 aa13.33□□□□□ -0.28
PHGDH-227ENST00000641811 IGKV1-39P01597 117 aa13.33□□□□□ -0.28
PHGDH-227ENST00000641811 IGKV1D-39P04432 117 aa13.33□□□□□ -0.28
PHGDH-227ENST00000641811 OR4C16Q8NGL9 310 aa13.33□□□□□ -0.28
PHGDH-227ENST00000641811 OR13C8Q8NGS7 320 aa13.33□□□□□ -0.28
PHGDH-227ENST00000641811 DNAH3Q8TD57 4116 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 ANKRD20A5PA0PJZ0 165 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 NPIPB5A8MRT5 1133 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 ZNF701M0R085 212 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-227ENST00000641811 OR2J3O76001 311 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 TRBV12-3P01733 135 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 AKAIN1P0CW23 69 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 PIGPP57054 158 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 RND3P61587 244 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 MEF2DQ14814 521 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 C9orf66Q5T8R8 295 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 ZNF343Q6P1L6 599 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 REC114Q7Z4M0 266 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 SLC25A42Q86VD7 318 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 ZNF486Q96H40 463 aaPredicted RBP13.32□□□□□ -0.28
PHGDH-227ENST00000641811 USMG5Q96IX5 58 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 COMMD5Q9GZQ3 224 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 ZNF257Q9Y2Q1 563 aa13.32□□□□□ -0.28
PHGDH-227ENST00000641811 TEX50A0A1B0GTY4 177 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 WI2-2373I1.2A0A1W2PRP0 233 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 DISC1C4P0D8 188 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 PSMB6P28072 239 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 ATP5G2Q06055 141 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 OR10W1Q8NGF6 305 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 ZFAND1Q8TCF1 268 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 MRAPQ8TCY5 172 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 SEC22AQ96IW7 307 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 FANCD2OSQ96PS1 177 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 TP53RKQ96S44 253 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 RANGRFQ9HD47 186 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-227ENST00000641811 FAM212BQ9NTI7 297 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-227ENST00000641811 V9GYH0 126 aa13.31□□□□□ -0.28
PHGDH-227ENST00000641811 PRKDCP78527 4128 aaKnown RBP13.3□□□□□ -0.28
PHGDH-227ENST00000641811 IGLC7A0M8Q6 106 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 FAM223BA6NKX1 122 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 K7EIL1 84 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 SERPINE2P07093 398 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 CRYGCP07315 174 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 CTRB1P17538 263 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 S100A5P33763 92 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 EXOSC2Q13868 293 aaKnown RBP13.3□□□□□ -0.28
PHGDH-227ENST00000641811 PYDC2Q56P42 97 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 CTRB2Q6GPI1 263 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 FAM223AQ8IWN6 122 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 NECAP1Q8NC96 275 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 OR51S1Q8NGJ8 323 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 THAP7Q9BT49 309 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-227ENST00000641811 QTRT1Q9BXR0 403 aaKnown RBP13.3□□□□□ -0.28
PHGDH-227ENST00000641811 PEF1Q9UBV8 284 aaKnown RBP13.3□□□□□ -0.28
PHGDH-227ENST00000641811 FBXL7Q9UJT9 491 aa13.3□□□□□ -0.28
PHGDH-227ENST00000641811 C3orf85A0A1B0GTC6 90 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 DBX1A6NMT0 343 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 SNAPC5O75971 98 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 NDUFB8O95169 186 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 CTSDP07339 412 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-227ENST00000641811 TRAPPC2P0DI81 140 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 TRAPPC2BP0DI82 140 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 PTBP1P26599 531 aaKnown RBP eCLIP13.29□□□□□ -0.28
PHGDH-227ENST00000641811 ZNF79Q15937 498 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 C15orf32Q32M92 178 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 SP6Q3SY56 376 aa13.29□□□□□ -0.28
PHGDH-227ENST00000641811 CCDC190Q86UF4 302 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms