RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 ESM1Q9NQ30 184 aa6.93□□□□□ -1.3
CDKL5-206ENST00000623610 KCNIP2Q9NS61 270 aa6.93□□□□□ -1.3
CDKL5-206ENST00000623610 CA10Q9NS85 328 aa6.93□□□□□ -1.3
CDKL5-206ENST00000623610 CCDC167Q9P0B6 97 aa6.93□□□□□ -1.3
CDKL5-206ENST00000623610 ZNF257Q9Y2Q1 563 aa6.93□□□□□ -1.3
CDKL5-206ENST00000623610 A0A1B0GTL3 188 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 LMX1BO60663 402 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 RAMP1O60894 148 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 REM1O75628 298 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 CD14P08571 375 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 ZNF140P52738 457 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-206ENST00000623610 CTBP2P56545 445 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 UBE2NP61088 152 aaKnown RBP6.92□□□□□ -1.3
CDKL5-206ENST00000623610 GRB2P62993 217 aaKnown RBP6.92□□□□□ -1.3
CDKL5-206ENST00000623610 ZNF92Q03936 586 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 CATR1Q13166 79 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 DHRS2Q13268 280 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 DUSP5Q16690 384 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 ZNF429Q86V71 674 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 OR10G6Q8NH81 332 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 FRZBQ92765 325 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 GGTLC1Q9BX51 225 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 POLR2J3Q9H1A7 115 aaKnown RBP6.92□□□□□ -1.3
CDKL5-206ENST00000623610 WDR13Q9H1Z4 485 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 NOX3Q9HBY0 568 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 ASF1BQ9NVP2 202 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 EHFQ9NZC4 300 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 PI4KAP42356 2102 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 CEP192Q8TEP8 1941 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 OR1I1O60431 355 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 GPX1P07203 203 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 CR2P20023 1033 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 PPICP45877 212 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 ZNF141Q15928 474 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 TMEM30BQ3MIR4 351 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 TMEM244Q5VVB8 128 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 DGAT2L6Q6ZPD8 337 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 Q8TCH9 128 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 PHLDA1Q8WV24 401 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-206ENST00000623610 ZNF226Q9NYT6 803 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 DNAJC15Q9Y5T4 150 aa6.92□□□□□ -1.3
CDKL5-206ENST00000623610 A0A1B0GV50 99 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 SPINK8P0C7L1 97 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 PGAM2P15259 253 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 DAZ2Q13117 558 aaKnown RBP6.91□□□□□ -1.3
CDKL5-206ENST00000623610 ECSCRQ19T08 205 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 LCNL1Q6ZST4 164 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 DAZ4Q86SG3 579 aaKnown RBP6.91□□□□□ -1.3
CDKL5-206ENST00000623610 DEFB125Q8N687 156 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 BPIFB6Q8NFQ5 453 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 CT55Q8WUE5 264 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 FAM19A4Q96LR4 140 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 DAZ1Q9NQZ3 744 aaKnown RBP6.91□□□□□ -1.3
CDKL5-206ENST00000623610 DAZ3Q9NR90 486 aaKnown RBP6.91□□□□□ -1.3
CDKL5-206ENST00000623610 NUFIP1Q9UHK0 495 aaKnown RBP6.91□□□□□ -1.3
CDKL5-206ENST00000623610 KCNE5Q9UJ90 142 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 A0A087WZ39 114 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 J3QT63 122 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 OVOL1O14753 267 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 HBG1P69891 147 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 HBG2P69892 147 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 MMDQ15546 238 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 IQCJQ1A5X6 159 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 SPANXN4Q5MJ08 99 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 PIK3CD-AS1Q5SR53 167 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 FOXI2Q6ZQN5 318 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 C20orf196Q8IYI0 205 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 DEFB119Q8N690 84 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 GVQW1Q8N7I0 195 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 SLC35G3Q8N808 338 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 DCAF4L2Q8NA75 395 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 OR52N5Q8NH56 324 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 RHOXF1Q8NHV9 184 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 S100A13Q99584 98 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 SELENOIQ9C0D9 397 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 PNRC2Q9NPJ4 139 aaKnown RBP6.91□□□□□ -1.3
CDKL5-206ENST00000623610 DEPPQ9NTK1 212 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 FBXL12Q9NXK8 326 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 ZNF443Q9Y2A4 671 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-206ENST00000623610 WDFY3Q8IZQ1 3526 aa6.91□□□□□ -1.3
CDKL5-206ENST00000623610 TRAV8-4A0A0B4J246 113 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 IGHV1OR15-9A0A0B4J2B8 117 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 TEX50A0A1B0GTY4 177 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 A0A1B0GWB2 263 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 SHISA9B4DS77 424 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 LINC00032P0C843 101 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 EIF5AP63241 154 aaKnown RBP6.9□□□□□ -1.3
CDKL5-206ENST00000623610 RIGQ13278 110 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 CD226Q15762 336 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 NXNL2Q5VZ03 156 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 ZNF324BQ6AW86 544 aaPredicted RBP6.9□□□□□ -1.3
CDKL5-206ENST00000623610 EIF5AL1Q6IS14 154 aaKnown RBP6.9□□□□□ -1.3
CDKL5-206ENST00000623610 CIB3Q96Q77 187 aaPredicted RBP6.9□□□□□ -1.3
CDKL5-206ENST00000623610 PITX2Q99697 317 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 KCNIP1Q9NZI2 227 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 NTMQ9P121 344 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 TAAR2Q9P1P5 351 aa6.9□□□□□ -1.3
CDKL5-206ENST00000623610 RIMS3Q9UJD0 308 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms