RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 UCP1P25874 307 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 CD1BP29016 333 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 IFITM2Q01629 132 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 IGF2-ASQ6U949 168 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 MMD2Q8IY49 270 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 PNKDQ8N490 385 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 ABCA4P78363 2273 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 TRBV23-1A0A0A0MS06 115 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 GNG7O60262 68 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 LYZP61626 148 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 NHLRC3Q5JS37 347 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 SCGB1D4Q6XE38 83 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 WDFY1Q8IWB7 410 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 TMEM116Q8NCL8 245 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 TUBD1Q9UJT1 453 aa11.66□□□□□ -0.54
CIITA-213ENST00000618327 SLC25A17O43808 307 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 HSPE1P61604 102 aaKnown RBP11.65□□□□□ -0.54
CIITA-213ENST00000618327 RUNX1Q01196 453 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 C2orf68Q2NKX9 166 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 ZNF660Q6AZW8 331 aaPredicted RBP11.65□□□□□ -0.54
CIITA-213ENST00000618327 BPIFA4PQ86YQ2 179 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 OR4C13Q8NGP0 309 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 METTL1Q9UBP6 276 aaKnown RBP11.65□□□□□ -0.54
CIITA-213ENST00000618327 A1L4Q6 167 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 C5orf52A6NGY3 159 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 SRRM5B3KS81 715 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 DIRC3C9JPN6 131 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 F8VVB4 439 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 F8VWA3 439 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 CORTO00230 105 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 FAM157CP0CG43 387 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 PSG5Q15238 335 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 RPRMLQ8N4K4 120 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 OR51M1Q9H341 326 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 CBLN4Q9NTU7 201 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 LINC00312Q9Y6C7 94 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 OR2T8A6NH00 312 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 CFDP00746 253 aaPredicted RBP11.65□□□□□ -0.54
CIITA-213ENST00000618327 CA7P43166 264 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 PSMB2P49721 201 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 FAM3BP58499 235 aaPredicted RBP11.65□□□□□ -0.54
CIITA-213ENST00000618327 LINC00518Q8N0U6 118 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 VKORC1L1Q8N0U8 176 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 RNF2Q99496 336 aa11.65□□□□□ -0.54
CIITA-213ENST00000618327 FBLL1A6NHQ2 334 aaKnown RBP11.65□□□□□ -0.55
CIITA-213ENST00000618327 MDKP21741 143 aaPredicted RBP11.65□□□□□ -0.55
CIITA-213ENST00000618327 QRFPP83859 136 aa11.65□□□□□ -0.55
CIITA-213ENST00000618327 ZNF146Q15072 292 aa11.65□□□□□ -0.55
CIITA-213ENST00000618327 COLCA1Q6ZS62 124 aa11.65□□□□□ -0.55
CIITA-213ENST00000618327 OR4P4Q8NGL7 312 aa11.65□□□□□ -0.55
CIITA-213ENST00000618327 SGMS2Q8NHU3 365 aa11.65□□□□□ -0.55
CIITA-213ENST00000618327 DENND4AQ7Z401 1863 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 CTXND1A0A1B0GTU2 59 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 F5H697 171 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 PDPNQ86YL7 162 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 FAM169BQ8N8A8 192 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 C5orf17Q8NAS9 161 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 OR1B1Q8NGR6 318 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 NPVFQ9HCQ7 196 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 IGKV1D-13A0A0B4J2D9 117 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 PDE6DO43924 150 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 FOXH1O75593 365 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 FAM106CPP0CH98 169 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 IGKV1-13P0DP09 117 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 MPZP25189 248 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 CDKN1AP38936 164 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 CYB561D1Q8N8Q1 229 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 AURKAIP1Q9NWT8 199 aaPredicted RBP11.64□□□□□ -0.55
CIITA-213ENST00000618327 ZGRF1Q86YA3 2104 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 M0QZ24 198 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 SIGLEC5O15389 551 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 COL8A1P27658 744 aa11.64□□□□□ -0.55
CIITA-213ENST00000618327 HELTA6NFD8 242 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 C10orf142B7Z368 130 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 TRGC2P03986 189 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 DNAH12Q6ZR08 3092 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 IFITM10A6NMD0 228 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 SERF2P84101 59 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 SSBP3Q9BWW4 388 aaPredicted RBP11.63□□□□□ -0.55
CIITA-213ENST00000618327 TCF19Q9Y242 345 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 KBTBD11O94819 623 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 P01737 135 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 ECSCRQ19T08 205 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.63□□□□□ -0.55
CIITA-213ENST00000618327 OR2D3Q8NGH3 330 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 SMIM12Q96EX1 92 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 OR4C12Q96R67 309 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 TLNRD1Q9H1K6 362 aa11.63□□□□□ -0.55
CIITA-213ENST00000618327 C17orf98A8MV24 154 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 TNFSF13O75888 250 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 DDTP30046 118 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 RSG1Q9BU20 258 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 LYNX1G3V0Z9 82 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 LYNX1P0DP58 116 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 ZNF343Q6P1L6 599 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 IGHV3-21A0A0B4J1V1 117 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 BCL2P10415 239 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 CCL3L1P16619 93 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms