RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 DLX4Q92988 240 aaPredicted RBP9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 MRGPRFQ96AM1 343 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 GPR61Q9BZJ8 451 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 HRASLSQ9HDD0 168 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 SLC2A9Q9NRM0 540 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 TMEM140Q9NV12 185 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 RABL2AQ9UBK7 228 aaPredicted RBP9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 RSL24D1Q9UHA3 163 aaKnown RBP9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 RABL2BQ9UNT1 228 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 DNAH9Q9NYC9 4486 aa9.86□□□□□ -0.83
SHROOM1-207ENST00000606676 A0A0G2JLM5 398 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 C13orf42A0A1B0GVH6 325 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 MARCH11A6NNE9 402 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 NPIPB5A8MRT5 1133 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 SEC14L6B5MCN3 397 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 ZNF701M0R085 212 aaPredicted RBP9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 KRASP01116 189 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 AREGP15514 252 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 PI3P19957 117 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 OR2B8PP59922 312 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 RHOGP84095 191 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 CADM3Q8N126 398 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 DMBX1Q8NFW5 382 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 TERB2Q8NHR7 220 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 USMG5Q96IX5 58 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 FYTTD1Q96QD9 318 aaKnown RBP9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 AKIP1Q9NQ31 210 aa9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 FAM212BQ9NTI7 297 aaPredicted RBP9.85□□□□□ -0.83
SHROOM1-207ENST00000606676 FABP12A6NFH5 140 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 GSTZ1O43708 216 aaPredicted RBP9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 IGKV1-39P01597 117 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 IGKV1D-39P04432 117 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 CRYGCP07315 174 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 FGF2P09038 288 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 G6PCP35575 357 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 RND3P61587 244 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 C9orf66Q5T8R8 295 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 FAAP20Q6NZ36 180 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 ZNF343Q6P1L6 599 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 ZNF486Q96H40 463 aaPredicted RBP9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 RANGRFQ9HD47 186 aaPredicted RBP9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 ZNF257Q9Y2Q1 563 aa9.84□□□□□ -0.83
SHROOM1-207ENST00000606676 TEX50A0A1B0GTY4 177 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 WI2-2373I1.2A0A1W2PRP0 233 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 ANKRD20A5PA0PJZ0 165 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 ANKRD34BA5PLL1 514 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 K7EIL1 84 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 OVOL1O14753 267 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 TRBV12-3P01733 135 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 PGAM2P15259 253 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 CTRB1P17538 263 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 PTBP1P26599 531 aaKnown RBP eCLIP9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 PSMB6P28072 239 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 S100GP29377 79 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 PPP5CP53041 499 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 PIGPP57054 158 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 ERVK-16P61578 105 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 KLK9Q2XQG4 91 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 CTRB2Q6GPI1 263 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 SLC25A42Q86VD7 318 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 SEC22AQ96IW7 307 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 FANCD2OSQ96PS1 177 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 KLK9Q9UKQ9 250 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 V9GYH0 126 aa9.83□□□□□ -0.84
SHROOM1-207ENST00000606676 IGLC7A0M8Q6 106 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 FAM223BA6NKX1 122 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 OR2J3O76001 311 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 REG1AP05451 166 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 AKAIN1P0CW23 69 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 MEF2DQ14814 521 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 SCGB2B2Q4G0G5 96 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 FAM223AQ8IWN6 122 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 NECAP1Q8NC96 275 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 OR10W1Q8NGF6 305 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 OR4C16Q8NGL9 310 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 OR13C8Q8NGS7 320 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 MARCH1Q8TCQ1 289 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 MRAPQ8TCY5 172 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 QTRT1Q9BXR0 403 aaKnown RBP9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 COMMD5Q9GZQ3 224 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 PEF1Q9UBV8 284 aaKnown RBP9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 NSG2Q9Y328 171 aa9.82□□□□□ -0.84
SHROOM1-207ENST00000606676 DPPA5A6NC42 116 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 DBX1A6NMT0 343 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 H0Y980 276 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 INSL3P51460 131 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 ATP5G2Q06055 141 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 KLF5Q13887 457 aaPredicted RBP9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 C15orf32Q32M92 178 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 ACSM6Q6P461 480 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 CCDC190Q86UF4 302 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 ZFAND1Q8TCF1 268 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 TP53RKQ96S44 253 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 SRSF8Q9BRL6 282 aaKnown RBP9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 RTBDNQ9BSG5 229 aaPredicted RBP9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 THAP7Q9BT49 309 aaPredicted RBP9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 NDUFA4L2Q9NRX3 87 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 DMRT1Q9Y5R6 373 aa9.81□□□□□ -0.84
SHROOM1-207ENST00000606676 IGLV11-55A0A075B6I3 123 aa9.8□□□□□ -0.84
SHROOM1-207ENST00000606676 C3orf85A0A1B0GTC6 90 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms