RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 CACFD1Q9UGQ2 172 aa12.16□□□□□ -0.46
FOXA3-202ENST00000594297 DNAH7Q8WXX0 4024 aa12.15□□□□□ -0.46
FOXA3-202ENST00000594297 C3orf84H3BNL1 204 aa12.15□□□□□ -0.46
FOXA3-202ENST00000594297 RAMP3O60896 148 aa12.15□□□□□ -0.46
FOXA3-202ENST00000594297 KRASP01116 189 aa12.15□□□□□ -0.46
FOXA3-202ENST00000594297 SNRNP70P08621 437 aaKnown RBP12.15□□□□□ -0.46
FOXA3-202ENST00000594297 TMEM11P17152 192 aa12.15□□□□□ -0.46
FOXA3-202ENST00000594297 VDAC1P21796 283 aa12.15□□□□□ -0.46
FOXA3-202ENST00000594297 LINC00205P59089 165 aa12.15□□□□□ -0.46
FOXA3-202ENST00000594297 ZNF585BQ52M93 769 aa12.15□□□□□ -0.46
FOXA3-202ENST00000594297 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
FOXA3-202ENST00000594297 THOC7Q6I9Y2 204 aaKnown RBP12.15□□□□□ -0.46
FOXA3-202ENST00000594297 SELENOHQ8IZQ5 122 aaKnown RBP12.15□□□□□ -0.46
FOXA3-202ENST00000594297 HUWE1Q7Z6Z7 4374 aaKnown RBP12.15□□□□□ -0.46
FOXA3-202ENST00000594297 DNAH1Q9P2D7 4330 aa12.15□□□□□ -0.47
FOXA3-202ENST00000594297 MARCH11A6NNE9 402 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 SNAPC5O75971 98 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 S1PR2O95136 353 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 SPDEFO95238 335 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 HNF4GQ14541 408 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 PLGLAQ15195 96 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 ANKRD55Q3KP44 614 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 C10orf99Q6UWK7 81 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 ETV3LQ6ZN32 361 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 LSM10Q969L4 123 aaKnown RBP12.14□□□□□ -0.47
FOXA3-202ENST00000594297 EAF1Q96JC9 268 aaPredicted RBP12.14□□□□□ -0.47
FOXA3-202ENST00000594297 RHOVQ96L33 236 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 GPR61Q9BZJ8 451 aa12.14□□□□□ -0.47
FOXA3-202ENST00000594297 C5orf51A6NDU8 294 aa12.13□□□□□ -0.47
FOXA3-202ENST00000594297 FAM90A9PA6NNJ1 464 aa12.13□□□□□ -0.47
FOXA3-202ENST00000594297 NCBP2LA6PVI3 153 aaKnown RBP12.13□□□□□ -0.47
FOXA3-202ENST00000594297 IGKV1-16P04430 117 aa12.13□□□□□ -0.47
FOXA3-202ENST00000594297 HOXB5P09067 269 aa12.13□□□□□ -0.47
FOXA3-202ENST00000594297 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
FOXA3-202ENST00000594297 EBI3Q14213 229 aa12.13□□□□□ -0.47
FOXA3-202ENST00000594297 GSG1LQ6UXU4 331 aa12.13□□□□□ -0.47
FOXA3-202ENST00000594297 CADM3Q8N126 398 aa12.13□□□□□ -0.47
FOXA3-202ENST00000594297 SLC35G3Q8N808 338 aa12.13□□□□□ -0.47
FOXA3-202ENST00000594297 OR4A5Q8NH83 315 aa12.13□□□□□ -0.47
FOXA3-202ENST00000594297 TENM2Q9NT68 2774 aa12.13□□□□□ -0.47
FOXA3-202ENST00000594297 A0A0B4J293 547 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 C13orf42A0A1B0GVH6 325 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 FAM25EA8MYX2 175 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 M0QZK8 103 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 RBMXL2O75526 392 aaKnown RBP12.12□□□□□ -0.47
FOXA3-202ENST00000594297 ACTL6BO94805 426 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 OR2A4O95047 310 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 G6PCP35575 357 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 BRWD1-AS2P59051 145 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 UBE2KP61086 200 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 RRAS2P62070 204 aaPredicted RBP12.12□□□□□ -0.47
FOXA3-202ENST00000594297 CYCSP99999 105 aaKnown RBP12.12□□□□□ -0.47
FOXA3-202ENST00000594297 MMDQ15546 238 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 POU2AF1Q16633 256 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 C16orf82Q7Z2V1 217 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 LYZL2Q7Z4W2 148 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 CENPVQ7Z7K6 275 aaPredicted RBP12.12□□□□□ -0.47
FOXA3-202ENST00000594297 MRPL41Q8IXM3 137 aaKnown RBP12.12□□□□□ -0.47
FOXA3-202ENST00000594297 TEX45Q8NA69 505 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 OR4X2Q8NGF9 303 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 OR4A16Q8NH70 328 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 OR2A7Q96R45 310 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 PDCD10Q9BUL8 212 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 GAR1Q9NY12 217 aaKnown RBP12.12□□□□□ -0.47
FOXA3-202ENST00000594297 FKBP11Q9NYL4 201 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 PRR13Q9NZ81 148 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 MGAT4CQ9UBM8 478 aa12.12□□□□□ -0.47
FOXA3-202ENST00000594297 STAB2Q8WWQ8 2551 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 hCG_2014768A0A024R1R8 64 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 A0A1B0GU03 582 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 GOSR2O14653 212 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 NBR2O15453 112 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 CD24P25063 80 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 CASC10Q5T4H9 136 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 SSX9Q7RTT3 188 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 SEC22AQ96IW7 307 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 RASL11BQ9BPW5 248 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 BET1LQ9NYM9 111 aa12.11□□□□□ -0.47
FOXA3-202ENST00000594297 HMX3A6NHT5 357 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 DBX1A6NMT0 343 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 SLC25A17O43808 307 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 SULT1A3P0DMM9 295 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 SULT1A4P0DMN0 295 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 SLC25A6P12236 298 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 HLA-GP17693 338 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 PSG5Q15238 335 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 GGNBP1Q5YKI7 109 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 OR4A47Q6IF82 309 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 NPBQ8NG41 125 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 LHFPL5Q8TAF8 219 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 ASB13Q8WXK3 278 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 RBM14Q96PK6 669 aaKnown RBP12.1□□□□□ -0.47
FOXA3-202ENST00000594297 LYSTQ99698 3801 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.1□□□□□ -0.47
FOXA3-202ENST00000594297 ZFP57Q9NU63 452 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 TMEM140Q9NV12 185 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 METTL1Q9UBP6 276 aaKnown RBP12.1□□□□□ -0.47
FOXA3-202ENST00000594297 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
FOXA3-202ENST00000594297 RRHO14718 337 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms