RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	TBC1D26	Q86UD7	250 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	CMTM1	Q8IZ96	169 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	SLC38A6	Q8IZM9	456 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	ARRDC1	Q8N5I2	433 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	MCFD2	Q8NI22	146 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	AKIP1	Q9NQ31	210 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	SLC2A9	Q9NRM0	540 aa		13.3	□□□□□ -0.28
MBD1-221	ENST00000589867	NPIPB5	A8MRT5	1133 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	SEC14L6	B5MCN3	397 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	GSTZ1	O43708	216 aa	Predicted RBP	13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	NOL3	O60936	208 aa	Known RBP	13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	CRYGC	P07315	174 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	CD40LG	P29965	261 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	TAS2R19	P59542	299 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	RND3	P61587	244 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	SSBP1	Q04837	148 aa	Known RBP	13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	IL18	Q14116	193 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	STEAP1B	Q6NZ63	245 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	LPCAT3	Q6P1A2	487 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	CADM3	Q8N126	398 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	DPF1	Q92782	380 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	FYTTD1	Q96QD9	318 aa	Known RBP	13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	HRASLS	Q9HDD0	168 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	DMRT1	Q9Y5R6	373 aa		13.29	□□□□□ -0.28
MBD1-221	ENST00000589867	IGLC7	A0M8Q6	106 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	DBX1	A6NMT0	343 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	MARCH11	A6NNE9	402 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	OVOL1	O14753	267 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	RAB3D	O95716	219 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	FGF2	P09038	288 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	CTRB1	P17538	263 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	PTBP1	P26599	531 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	G6PC	P35575	357 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	RHOG	P84095	191 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	C9orf66	Q5T8R8	295 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	CTRB2	Q6GPI1	263 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	USMG5	Q96IX5	58 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	AIFM2	Q9BRQ8	373 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	GPR61	Q9BZJ8	451 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	RSL24D1	Q9UHA3	163 aa	Known RBP	13.28	□□□□□ -0.28
MBD1-221	ENST00000589867	COL7A1	Q02388	2944 aa		13.28	□□□□□ -0.28
MBD1-221	ENST00000589867		A0A0G2JLM5	398 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	C13orf42	A0A1B0GVH6	325 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	ANKRD34B	A5PLL1	514 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	MPPED1	O15442	326 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	KRAS	P01116	189 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	PSMB6	P28072	239 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	DMBX1	Q8NFW5	382 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	OR4C16	Q8NGL9	310 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	TERB2	Q8NHR7	220 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	MRAP	Q8TCY5	172 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	SEC22A	Q96IW7	307 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	ZNF257	Q9Y2Q1	563 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	NSG2	Q9Y328	171 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867		V9GYH0	126 aa		13.27	□□□□□ -0.29
MBD1-221	ENST00000589867	TEX50	A0A1B0GTY4	177 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	ANKRD20A5P	A0PJZ0	165 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	ZNF701	M0R085	212 aa	Predicted RBP	13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	OR2J3	O76001	311 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	IFNA6	P05013	189 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	REG1A	P05451	166 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	PPP5C	P53041	499 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	ACSM6	Q6P461	480 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	OR10W1	Q8NGF6	305 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	OR13C8	Q8NGS7	320 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	ZNF486	Q96H40	463 aa	Predicted RBP	13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	TP53RK	Q96S44	253 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	RABL2B	Q9UNT1	228 aa		13.26	□□□□□ -0.29
MBD1-221	ENST00000589867	FABP12	A6NFH5	140 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	CCDC160	A6NGH7	325 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	FAM223B	A6NKX1	122 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	NDUFB8	O95169	186 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867		P0C879	139 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	PGAM2	P15259	253 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	PIGP	P57054	158 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	KLF5	Q13887	457 aa	Predicted RBP	13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	ZNF79	Q15937	498 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	IL34	Q6ZMJ4	242 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	SLC25A42	Q86VD7	318 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	FAM223A	Q8IWN6	122 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	MARCH1	Q8TCQ1	289 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	RANGRF	Q9HD47	186 aa	Predicted RBP	13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	NDUFA4L2	Q9NRX3	87 aa		13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	PEF1	Q9UBV8	284 aa	Known RBP	13.25	□□□□□ -0.29
MBD1-221	ENST00000589867	IGLV11-55	A0A075B6I3	123 aa		13.24	□□□□□ -0.29
MBD1-221	ENST00000589867	BMPR1B	O00238	502 aa		13.24	□□□□□ -0.29
MBD1-221	ENST00000589867	WT1-AS	Q06250	92 aa		13.24	□□□□□ -0.29
MBD1-221	ENST00000589867	EXOSC2	Q13868	293 aa	Known RBP	13.24	□□□□□ -0.29
MBD1-221	ENST00000589867	SCGB2B2	Q4G0G5	96 aa		13.24	□□□□□ -0.29
MBD1-221	ENST00000589867	CCDC190	Q86UF4	302 aa		13.24	□□□□□ -0.29
MBD1-221	ENST00000589867	NECAP1	Q8NC96	275 aa		13.24	□□□□□ -0.29
MBD1-221	ENST00000589867	TRIM63	Q969Q1	353 aa		13.24	□□□□□ -0.29
MBD1-221	ENST00000589867	QTRT1	Q9BXR0	403 aa	Known RBP	13.24	□□□□□ -0.29
MBD1-221	ENST00000589867	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.23	□□□□□ -0.29
MBD1-221	ENST00000589867		H0Y980	276 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	IGKV1-5	P01602	117 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	CTSD	P07339	412 aa	Predicted RBP	13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 82 ms