RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 SLC2A9Q9NRM0 540 aa13.05□□□□□ -0.32
H3F3B-208ENST00000589599 FAM212BQ9NTI7 297 aaPredicted RBP13.05□□□□□ -0.32
H3F3B-208ENST00000589599 TMEM140Q9NV12 185 aa13.05□□□□□ -0.32
H3F3B-208ENST00000589599 RSL24D1Q9UHA3 163 aaKnown RBP13.05□□□□□ -0.32
H3F3B-208ENST00000589599 ZNF257Q9Y2Q1 563 aa13.05□□□□□ -0.32
H3F3B-208ENST00000589599 TEX22C9J3V5 150 aa13.04□□□□□ -0.32
H3F3B-208ENST00000589599 CTDSPLO15194 276 aa13.04□□□□□ -0.32
H3F3B-208ENST00000589599 RAB3DO95716 219 aa13.04□□□□□ -0.32
H3F3B-208ENST00000589599 DHFRP00374 187 aa13.04□□□□□ -0.32
H3F3B-208ENST00000589599 FGF2P09038 288 aa13.04□□□□□ -0.32
H3F3B-208ENST00000589599 RPA2P15927 270 aa13.04□□□□□ -0.32
H3F3B-208ENST00000589599 STEAP1BQ6NZ63 245 aa13.04□□□□□ -0.32
H3F3B-208ENST00000589599 TBC1D26Q86UD7 250 aa13.04□□□□□ -0.32
H3F3B-208ENST00000589599 NECAP1Q8NC96 275 aa13.04□□□□□ -0.32
H3F3B-208ENST00000589599 ZNF486Q96H40 463 aaPredicted RBP13.04□□□□□ -0.32
H3F3B-208ENST00000589599 PEF1Q9UBV8 284 aaKnown RBP13.04□□□□□ -0.32
H3F3B-208ENST00000589599 TGP01266 2768 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 MARCH11A6NNE9 402 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 NPIPB5A8MRT5 1133 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 SNAPC5O75971 98 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 KRASP01116 189 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 PRH1P02810 166 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 CD74P04233 296 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 MEF2DQ14814 521 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 ZNF343Q6P1L6 599 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 ZNF429Q86V71 674 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 CADM3Q8N126 398 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 TERB2Q8NHR7 220 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 ZFAND1Q8TCF1 268 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 SMIM4Q8WVI0 70 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 AKIP1Q9NQ31 210 aa13.03□□□□□ -0.32
H3F3B-208ENST00000589599 TRBV9A0A0B4J1U6 114 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 TRAV3A0A0B4J244 114 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 FABP12A6NFH5 140 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 E7EUB6 86 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 SERPINE2P07093 398 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 DEFA4P12838 97 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 PSMB6P28072 239 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 TNFSF8P32971 234 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 OR2B8PP59922 312 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 TATDN3Q17R31 274 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 SCGB2B2Q4G0G5 96 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 DEFB121Q5J5C9 76 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 FAM209BQ5JX69 171 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 LHFPL1Q86WI0 220 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 SRSF8Q9BRL6 282 aaKnown RBP13.02□□□□□ -0.33
H3F3B-208ENST00000589599 ELOVL1Q9BW60 279 aa13.02□□□□□ -0.33
H3F3B-208ENST00000589599 NXF2Q9GZY0 626 aaKnown RBP13.02□□□□□ -0.33
H3F3B-208ENST00000589599 TNCP24821 2201 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 WI2-2373I1.2A0A1W2PRP0 233 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 DISC1C4P0D8 188 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 K7EIL1 84 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 SAP30O75446 220 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 CRYGCP07315 174 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 MYOD1P15172 320 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 AREGP15514 252 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 HIST1H1BP16401 226 aaKnown RBP13.01□□□□□ -0.33
H3F3B-208ENST00000589599 G6PCP35575 357 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 ECI1P42126 302 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 RND3P61587 244 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 DEFA5Q01523 94 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 ZNF45Q02386 682 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 DCTN2Q13561 401 aaKnown RBP13.01□□□□□ -0.33
H3F3B-208ENST00000589599 OR4D10Q8NGI6 311 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 OR1L8Q8NGR8 309 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 OR4C12Q96R67 309 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 QTRT1Q9BXR0 403 aaKnown RBP13.01□□□□□ -0.33
H3F3B-208ENST00000589599 FKBP11Q9NYL4 201 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 FBXL7Q9UJT9 491 aa13.01□□□□□ -0.33
H3F3B-208ENST00000589599 A0A1B0GW64 132 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 CYB5BO43169 146 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 GSTZ1O43708 216 aaPredicted RBP13□□□□□ -0.33
H3F3B-208ENST00000589599 OR2J3O76001 311 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 AKAIN1P0CW23 69 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 TRAPPC2P0DI81 140 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 TRAPPC2BP0DI82 140 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 PI3P19957 117 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 PPP5CP53041 499 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 PIGPP57054 158 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 EXOSC2Q13868 293 aaKnown RBP13□□□□□ -0.33
H3F3B-208ENST00000589599 C15orf32Q32M92 178 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 THOC7Q6I9Y2 204 aaKnown RBP13□□□□□ -0.33
H3F3B-208ENST00000589599 HSD17B13Q7Z5P4 300 aaPredicted RBP13□□□□□ -0.33
H3F3B-208ENST00000589599 CCDC71LQ8N9Z2 235 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 TSC22D3Q99576 134 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 COPZ2Q9P299 210 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 PRNDQ9UKY0 176 aa13□□□□□ -0.33
H3F3B-208ENST00000589599 TEX50A0A1B0GTY4 177 aa12.99□□□□□ -0.33
H3F3B-208ENST00000589599 ZNF701M0R085 212 aaPredicted RBP12.99□□□□□ -0.33
H3F3B-208ENST00000589599 RBMXL2O75526 392 aaKnown RBP12.99□□□□□ -0.33
H3F3B-208ENST00000589599 CTRB1P17538 263 aa12.99□□□□□ -0.33
H3F3B-208ENST00000589599 PTBP1P26599 531 aaKnown RBP eCLIP12.99□□□□□ -0.33
H3F3B-208ENST00000589599 S100A5P33763 92 aa12.99□□□□□ -0.33
H3F3B-208ENST00000589599 KLF5Q13887 457 aaPredicted RBP12.99□□□□□ -0.33
H3F3B-208ENST00000589599 RPEL1Q2QD12 228 aa12.99□□□□□ -0.33
H3F3B-208ENST00000589599 CTRB2Q6GPI1 263 aa12.99□□□□□ -0.33
H3F3B-208ENST00000589599 ACSM6Q6P461 480 aa12.99□□□□□ -0.33
H3F3B-208ENST00000589599 H2BFWTQ7Z2G1 175 aa12.99□□□□□ -0.33
H3F3B-208ENST00000589599 SOSTQ9BQB4 213 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms