RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PLSCR3Q9NRY6 295 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 FKBP11Q9NYL4 201 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 PRNDQ9UKY0 176 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 ZNF257Q9Y2Q1 563 aa11.9□□□□□ -0.5
NFIX-208ENST00000587260 A6NDX4 124 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
NFIX-208ENST00000587260 H0YIZ8 118 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 K7EPK0 472 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 RRHO14718 337 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 NBR2O15453 112 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 SLC25A17O43808 307 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 F2RL1P55085 397 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 ZFP69Q49AA0 526 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 C11orf87Q6NUJ2 197 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 PRSS54Q6PEW0 395 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 TMEM65Q6PI78 240 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 FAM71E2Q8N5Q1 922 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 OR11H4Q8NGC9 324 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 OR5R1Q8NH85 324 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 ZNF418Q8TF45 676 aaPredicted RBP11.89□□□□□ -0.51
NFIX-208ENST00000587260 SLC25A33Q9BSK2 321 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 ESM1Q9NQ30 184 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 VPREB3Q9UKI3 123 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 NSG2Q9Y328 171 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 SIGLEC9Q9Y336 463 aa11.89□□□□□ -0.51
NFIX-208ENST00000587260 CHST1O43916 411 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 DEDDO75618 318 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 RLN2P04090 185 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 SPCS3P61009 180 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 TNFRSF9Q07011 255 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 LRRC37A5PQ49AS3 106 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 NOXA1Q86UR1 476 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 PPP1R27Q86WC6 154 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 THAP6Q8TBB0 222 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 C11orf1Q9H5F2 150 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 TPSG1Q9NRR2 321 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 C1RLQ9NZP8 487 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 PITPNC1Q9UKF7 332 aa11.88□□□□□ -0.51
NFIX-208ENST00000587260 RCL1Q9Y2P8 373 aaKnown RBP11.88□□□□□ -0.51
NFIX-208ENST00000587260 HMSDA8MTL9 139 aa11.87□□□□□ -0.51
NFIX-208ENST00000587260 MED6O75586 246 aa11.87□□□□□ -0.51
NFIX-208ENST00000587260 HNRNPCP07910 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
NFIX-208ENST00000587260 MAS1LP35410 378 aa11.87□□□□□ -0.51
NFIX-208ENST00000587260 HSPE1P61604 102 aaKnown RBP11.87□□□□□ -0.51
NFIX-208ENST00000587260 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
NFIX-208ENST00000587260 RPL8P62917 257 aaKnown RBP11.87□□□□□ -0.51
NFIX-208ENST00000587260 PRSS8Q16651 343 aa11.87□□□□□ -0.51
NFIX-208ENST00000587260 MMD2Q8IY49 270 aa11.87□□□□□ -0.51
NFIX-208ENST00000587260 OR5B3Q8NH48 314 aa11.87□□□□□ -0.51
NFIX-208ENST00000587260 RBM14Q96PK6 669 aaKnown RBP11.87□□□□□ -0.51
NFIX-208ENST00000587260 QTRT1Q9BXR0 403 aaKnown RBP11.87□□□□□ -0.51
NFIX-208ENST00000587260 FBXL15Q9H469 300 aa11.87□□□□□ -0.51
NFIX-208ENST00000587260 ZNF430Q9H8G1 570 aaPredicted RBP11.87□□□□□ -0.51
NFIX-208ENST00000587260 KIAA1456Q9P272 454 aa11.87□□□□□ -0.51
NFIX-208ENST00000587260 METTL1Q9UBP6 276 aaKnown RBP11.87□□□□□ -0.51
NFIX-208ENST00000587260 SH2D7A6NKC9 451 aaPredicted RBP11.86□□□□□ -0.51
NFIX-208ENST00000587260 BOLA2-SMG1P6H3BVE0 249 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 SYNGR2O43760 224 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 RBMXL2O75526 392 aaKnown RBP11.86□□□□□ -0.51
NFIX-208ENST00000587260 OR2F2O95006 317 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 LY86O95711 162 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 SCGB1D2O95969 90 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 OR2B8PP59922 312 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 HILS1P60008 231 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 S100A10P60903 97 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 PLGLAQ15195 96 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 C5orf64Q2M2E5 130 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 RAB40CQ96S21 281 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 MBD2Q9UBB5 411 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 MOB4Q9Y3A3 225 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 LSM5Q9Y4Y9 91 aaKnown RBP11.86□□□□□ -0.51
NFIX-208ENST00000587260 OR51B2Q9Y5P1 312 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 NF1P21359 2839 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 E5RGE8 158 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 TAS2R30P59541 319 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 Q8N9W7 124 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 CLCC1Q96S66 551 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 MAGT1Q9H0U3 335 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 OR5AC2Q9NZP5 309 aa11.86□□□□□ -0.51
NFIX-208ENST00000587260 TEX50A0A1B0GTY4 177 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 WRBO00258 174 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 PVALBP20472 110 aaPredicted RBP11.85□□□□□ -0.51
NFIX-208ENST00000587260 PAX9P55771 341 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 SRSF2Q01130 221 aaKnown RBP11.85□□□□□ -0.51
NFIX-208ENST00000587260 PJVKQ0ZLH3 352 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 ZNF546Q86UE3 836 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 TMEM86BQ8N661 226 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 C5orf56Q8N8D9 126 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 OR1L8Q8NGR8 309 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 SMIM8Q96KF7 97 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 COMMD5Q9GZQ3 224 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 RBKSQ9H477 322 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 NDUFA4L2Q9NRX3 87 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 TNFSF18Q9UNG2 199 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 WSB1Q9Y6I7 421 aa11.85□□□□□ -0.51
NFIX-208ENST00000587260 SETD2Q9BYW2 2564 aaPredicted RBP11.84□□□□□ -0.51
NFIX-208ENST00000587260 INS-IGF2F8WCM5 200 aa11.84□□□□□ -0.51
NFIX-208ENST00000587260 FGF16O43320 207 aa11.84□□□□□ -0.51
NFIX-208ENST00000587260 TCF21O43680 179 aa11.84□□□□□ -0.51
NFIX-208ENST00000587260 GPR137BO60478 399 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms