RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 SSBP1Q04837 148 aaKnown RBP15.5■□□□□ 0.07
SS18-218ENST00000581021 TTC9CQ8N5M4 171 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 OR4A5Q8NH83 315 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 DCUN1D4Q92564 292 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 FYTTD1Q96QD9 318 aaKnown RBP15.5■□□□□ 0.07
SS18-218ENST00000581021 V9GYH0 126 aa15.5■□□□□ 0.07
SS18-218ENST00000581021 MARCH11A6NNE9 402 aa15.49■□□□□ 0.07
SS18-218ENST00000581021 LINC01619G3V211 115 aa15.49■□□□□ 0.07
SS18-218ENST00000581021 ZNF701M0R085 212 aaPredicted RBP15.49■□□□□ 0.07
SS18-218ENST00000581021 GSTZ1O43708 216 aaPredicted RBP15.49■□□□□ 0.07
SS18-218ENST00000581021 TRBV12-3P01733 135 aa15.49■□□□□ 0.07
SS18-218ENST00000581021 G6PCP35575 357 aa15.49■□□□□ 0.07
SS18-218ENST00000581021 LPCAT3Q6P1A2 487 aa15.49■□□□□ 0.07
SS18-218ENST00000581021 DMBX1Q8NFW5 382 aa15.49■□□□□ 0.07
SS18-218ENST00000581021 OR4C16Q8NGL9 310 aa15.49■□□□□ 0.07
SS18-218ENST00000581021 DLX4Q92988 240 aaPredicted RBP15.49■□□□□ 0.07
SS18-218ENST00000581021 MCRIP2Q9BUT9 160 aaKnown RBP15.49■□□□□ 0.07
SS18-218ENST00000581021 AKIP1Q9NQ31 210 aa15.49■□□□□ 0.07
SS18-218ENST00000581021 TRBV9A0A0B4J1U6 114 aa15.48■□□□□ 0.07
SS18-218ENST00000581021 KRASP01116 189 aa15.48■□□□□ 0.07
SS18-218ENST00000581021 PGAM2P15259 253 aa15.48■□□□□ 0.07
SS18-218ENST00000581021 RHOGP84095 191 aa15.48■□□□□ 0.07
SS18-218ENST00000581021 OR13C8Q8NGS7 320 aa15.48■□□□□ 0.07
SS18-218ENST00000581021 DPF1Q92782 380 aa15.48■□□□□ 0.07
SS18-218ENST00000581021 C13orf42A0A1B0GVH6 325 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 IGLC7A0M8Q6 106 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 FABP12A6NFH5 140 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 DBX1A6NMT0 343 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 NPIPB5A8MRT5 1133 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 SEC14L6B5MCN3 397 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 HSPB1P04792 205 aaKnown RBP15.47■□□□□ 0.07
SS18-218ENST00000581021 REG1AP05451 166 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 RND3P61587 244 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 SCGB2B2Q4G0G5 96 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 TERB2Q8NHR7 220 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 AIFM2Q9BRQ8 373 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 RABL2AQ9UBK7 228 aaPredicted RBP15.47■□□□□ 0.07
SS18-218ENST00000581021 RABL2BQ9UNT1 228 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 NSG2Q9Y328 171 aa15.47■□□□□ 0.07
SS18-218ENST00000581021 WI2-2373I1.2A0A1W2PRP0 233 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 ANKRD20A5PA0PJZ0 165 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 ANKRD34BA5PLL1 514 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 K7EIL1 84 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 PIGPP57054 158 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 ZNF79Q15937 498 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 ZNF343Q6P1L6 599 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 MARCH1Q8TCQ1 289 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 TRIM63Q969Q1 353 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 SEC22AQ96IW7 307 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 FANCD2OSQ96PS1 177 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 TP53RKQ96S44 253 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 ZNF257Q9Y2Q1 563 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 DMRT1Q9Y5R6 373 aa15.46■□□□□ 0.07
SS18-218ENST00000581021 A0A0G2JLM5 398 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 CRYGCP07315 174 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 CTRB1P17538 263 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 PSMB6P28072 239 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 ERVK-16P61578 105 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 MEF2DQ14814 521 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 CTRB2Q6GPI1 263 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 REC114Q7Z4M0 266 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 OR10W1Q8NGF6 305 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 ZNF486Q96H40 463 aaPredicted RBP15.45■□□□□ 0.06
SS18-218ENST00000581021 USMG5Q96IX5 58 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 GPR61Q9BZJ8 451 aa15.45■□□□□ 0.06
SS18-218ENST00000581021 FAM212BQ9NTI7 297 aaPredicted RBP15.45■□□□□ 0.06
SS18-218ENST00000581021 TEX50A0A1B0GTY4 177 aa15.44■□□□□ 0.06
SS18-218ENST00000581021 OVOL1O14753 267 aa15.44■□□□□ 0.06
SS18-218ENST00000581021 OR2J3O76001 311 aa15.44■□□□□ 0.06
SS18-218ENST00000581021 FGF2P09038 288 aa15.44■□□□□ 0.06
SS18-218ENST00000581021 AKAIN1P0CW23 69 aa15.44■□□□□ 0.06
SS18-218ENST00000581021 PTBP1P26599 531 aaKnown RBP eCLIP15.44■□□□□ 0.06
SS18-218ENST00000581021 KLK9Q2XQG4 91 aa15.44■□□□□ 0.06
SS18-218ENST00000581021 CCDC190Q86UF4 302 aa15.44■□□□□ 0.06
SS18-218ENST00000581021 CADM3Q8N126 398 aa15.44■□□□□ 0.06
SS18-218ENST00000581021 KLK9Q9UKQ9 250 aa15.44■□□□□ 0.06
SS18-218ENST00000581021 FAM223BA6NKX1 122 aa15.43■□□□□ 0.06
SS18-218ENST00000581021 H0Y980 276 aa15.43■□□□□ 0.06
SS18-218ENST00000581021 S100GP29377 79 aa15.43■□□□□ 0.06
SS18-218ENST00000581021 WT1-ASQ06250 92 aa15.43■□□□□ 0.06
SS18-218ENST00000581021 EXOSC2Q13868 293 aaKnown RBP15.43■□□□□ 0.06
SS18-218ENST00000581021 IZUMO4Q1ZYL8 232 aa15.43■□□□□ 0.06
SS18-218ENST00000581021 C9orf66Q5T8R8 295 aa15.43■□□□□ 0.06
SS18-218ENST00000581021 FAM223AQ8IWN6 122 aa15.43■□□□□ 0.06
SS18-218ENST00000581021 NECAP1Q8NC96 275 aa15.43■□□□□ 0.06
SS18-218ENST00000581021 OR51S1Q8NGJ8 323 aa15.43■□□□□ 0.06
SS18-218ENST00000581021 RTBDNQ9BSG5 229 aaPredicted RBP15.43■□□□□ 0.06
SS18-218ENST00000581021 QTRT1Q9BXR0 403 aaKnown RBP15.43■□□□□ 0.06
SS18-218ENST00000581021 COMMD5Q9GZQ3 224 aa15.43■□□□□ 0.06
SS18-218ENST00000581021 RANGRFQ9HD47 186 aaPredicted RBP15.43■□□□□ 0.06
SS18-218ENST00000581021 IGLV11-55A0A075B6I3 123 aa15.42■□□□□ 0.06
SS18-218ENST00000581021 NDUFB8O95169 186 aa15.42■□□□□ 0.06
SS18-218ENST00000581021 IGKV1-5P01602 117 aa15.42■□□□□ 0.06
SS18-218ENST00000581021 CTSDP07339 412 aaPredicted RBP15.42■□□□□ 0.06
SS18-218ENST00000581021 KLF9Q13886 244 aaPredicted RBP15.42■□□□□ 0.06
SS18-218ENST00000581021 C15orf32Q32M92 178 aa15.42■□□□□ 0.06
SS18-218ENST00000581021 SP6Q3SY56 376 aa15.42■□□□□ 0.06
SS18-218ENST00000581021 SLC25A42Q86VD7 318 aa15.42■□□□□ 0.06
SS18-218ENST00000581021 MRAPQ8TCY5 172 aa15.42■□□□□ 0.06
SS18-218ENST00000581021 THAP7Q9BT49 309 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms