RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 C9orf66Q5T8R8 295 aa10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 TBC1D26Q86UD7 250 aa10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 CADM3Q8N126 398 aa10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 OR4D10Q8NGI6 311 aa10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 TERB2Q8NHR7 220 aa10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 ZNF486Q96H40 463 aaPredicted RBP10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 FYTTD1Q96QD9 318 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 RBM38Q9H0Z9 239 aaKnown RBP10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 SLC2A9Q9NRM0 540 aa10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 TMEM140Q9NV12 185 aa10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 AURKAIP1Q9NWT8 199 aaPredicted RBP10.67□□□□□ -0.7
HERPUD1-218ENST00000569569 TRAV3A0A0B4J244 114 aa10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 DPPA5A6NC42 116 aa10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 FABP12A6NFH5 140 aa10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 MARCH11A6NNE9 402 aa10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 PGAM2P15259 253 aa10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 HOXD3P31249 432 aaPredicted RBP10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 KRTAP10-11P60412 298 aa10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 MEF2DQ14814 521 aa10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 DCUN1D4Q92564 292 aa10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 SOSTQ9BQB4 213 aa10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 RANGRFQ9HD47 186 aaPredicted RBP10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 ZMAT5Q9UDW3 170 aaKnown RBP10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 ZNF257Q9Y2Q1 563 aa10.66□□□□□ -0.7
HERPUD1-218ENST00000569569 PRKDCP78527 4128 aaKnown RBP10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 TRBV9A0A0B4J1U6 114 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 A0A1B0GW64 132 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 NPIPB5A8MRT5 1133 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 SEC14L6B5MCN3 397 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 OVOL1O14753 267 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 GSTZ1O43708 216 aaPredicted RBP10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 KRASP01116 189 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 MYOD1P15172 320 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 RPA2P15927 270 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 PTBP1P26599 531 aaKnown RBP eCLIP10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 SLURP1P55000 103 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 RND3P61587 244 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 ZNF45Q02386 682 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 SCGB2B2Q4G0G5 96 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 ZNF343Q6P1L6 599 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 ZFAND1Q8TCF1 268 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 DLX4Q92988 240 aaPredicted RBP10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 COMMD5Q9GZQ3 224 aa10.65□□□□□ -0.7
HERPUD1-218ENST00000569569 TGP01266 2768 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 ANKRD34BA5PLL1 514 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 CGB1A6NKQ9 187 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 FAM223BA6NKX1 122 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 DISC1C4P0D8 188 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 RBMXL2O75526 392 aaKnown RBP10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 DHFRP00374 187 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 PRH1P02810 166 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 CRYGCP07315 174 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 AKAIN1P0CW23 69 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 ZP3P21754 424 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 PSMB6P28072 239 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 S100A5P33763 92 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 G6PCP35575 357 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 ECI1P42126 302 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 INSL3P51460 131 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 PIGPP57054 158 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 OR2B8PP59922 312 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 RHOGP84095 191 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 DEFA5Q01523 94 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 ATP5G2Q06055 141 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 FAM223AQ8IWN6 122 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 NECAP1Q8NC96 275 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 MRAPQ8TCY5 172 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 AKIP1Q9NQ31 210 aa10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 PEF1Q9UBV8 284 aaKnown RBP10.64□□□□□ -0.71
HERPUD1-218ENST00000569569 ANKRD20A5PA0PJZ0 165 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 SNAPC5O75971 98 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 AREGP15514 252 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 CTRB1P17538 263 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 PI3P19957 117 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 PPP5CP53041 499 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 CTRB2Q6GPI1 263 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 THOC7Q6I9Y2 204 aaKnown RBP10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 FAAP20Q6NZ36 180 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 ZNF429Q86V71 674 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 CCDC71LQ8N9Z2 235 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 OR4C16Q8NGL9 310 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 MARCH1Q8TCQ1 289 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 TSC22D3Q99576 134 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 SRSF8Q9BRL6 282 aaKnown RBP10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 COPZ2Q9P299 210 aa10.63□□□□□ -0.71
HERPUD1-218ENST00000569569 TEX50A0A1B0GTY4 177 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 OR2J3O76001 311 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 SERPINE2P07093 398 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 CTSDP07339 412 aaPredicted RBP10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 TRAPPC2P0DI81 140 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 TRAPPC2BP0DI82 140 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 HIST1H1BP16401 226 aaKnown RBP10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 C15orf32Q32M92 178 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 FAM209BQ5JX69 171 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 ACSM6Q6P461 480 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 HSD17B13Q7Z5P4 300 aaPredicted RBP10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 OR1L8Q8NGR8 309 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 OR13C8Q8NGS7 320 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 SEC22AQ96IW7 307 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms