RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	TMEM69	Q5SWH9	247 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	OR2T5	Q6IEZ7	315 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	WDR93	Q6P2C0	686 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	ZNF880	Q6PDB4	577 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	GSG1L	Q6UXU4	331 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	MMD2	Q8IY49	270 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	OR2T29	Q8NH02	315 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	RNF125	Q96EQ8	232 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	CMTM3	Q96MX0	182 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	MAGT1	Q9H0U3	335 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	ZNF586	Q9NXT0	402 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	OR1A1	Q9P1Q5	309 aa		4.26	□□□□□ -1.73
BBS4-218	ENST00000569440	DPPA5	A6NC42	116 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	OR2T8	A6NH00	312 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	CREBL2	O60519	120 aa	Predicted RBP	4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	RRAS	P10301	218 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	COX4I1	P13073	169 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	HSD17B1	P14061	328 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	ZBTB25	P24278	435 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	GNRHR	P30968	328 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	ZNF93	P35789	620 aa	Predicted RBP	4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	ALDH3B2	P48448	385 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	SNRPG	P62308	76 aa	Known RBP	4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	GPR176	Q14439	515 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	UBE2U	Q5VVX9	321 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	SPSB3	Q6PJ21	355 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	TCF24	Q7RTU0	167 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	FAM220A	Q7Z4H9	259 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	OR10H4	Q8NGA5	316 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	VN1R17P	Q8TDU5	208 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	RAB24	Q969Q5	203 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	BSCL2	Q96G97	398 aa	Predicted RBP	4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	OR10C1	Q96KK4	312 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	NEDD4L	Q96PU5	975 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	S100A13	Q99584	98 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	C1QTNF4	Q9BXJ3	329 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	WARS2	Q9UGM6	360 aa	Known RBP	4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	RFNG	Q9Y644	331 aa		4.25	□□□□□ -1.73
BBS4-218	ENST00000569440	IGHV3-49	A0A0A0MS15	119 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	DNASE2	O00115	360 aa	Predicted RBP	4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	PDCD6	O75340	191 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	NAPSA	O96009	420 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	C1QB	P02746	253 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	RPSA	P08865	295 aa	Known RBP	4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	SAA1	P0DJI8	122 aa	Predicted RBP	4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	DEFA4	P12838	97 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	FGF9	P31371	208 aa	Predicted RBP	4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	DAD1	P61803	113 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	CBX3	Q13185	183 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	ATP6AP1	Q15904	470 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	RTL8B	Q17RB0	113 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	ACTL10	Q5JWF8	245 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	GID4	Q8IVV7	300 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	DUSP18	Q8NEJ0	188 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	OSR1	Q8TAX0	266 aa	Predicted RBP	4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	DGCR14	Q96DF8	476 aa	Known RBP	4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	C5orf30	Q96GV9	206 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	GRAMD2B	Q96HH9	432 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	ATP6V0B	Q99437	205 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	TMBIM4	Q9HC24	238 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	SDHAF2	Q9NX18	166 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	TAS2R4	Q9NYW5	299 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	XCL2	Q9UBD3	114 aa		4.24	□□□□□ -1.73
BBS4-218	ENST00000569440	TRAV14DV4	A0A0A6YYC5	116 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	CGB1	A6NKQ9	187 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	KRTAP9-7	A8MTY7	169 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440		K7EQG2	157 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440		M0R129	80 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	NUPL2	O15504	423 aa	Known RBP	4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	CRYZL1	O95825	349 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	HTR1A	P08908	422 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	GNB3	P16520	340 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	RPL27A	P46776	148 aa	Known RBP	4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	OR2B8P	P59922	312 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	NUTF2	P61970	127 aa	Known RBP	4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	PLA2G7	Q13093	441 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	TPBG	Q13641	420 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	CLINT1	Q14677	625 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	DDI2	Q5TDH0	399 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	CGB2	Q6NT52	195 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440		Q6ZSA8	131 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	CBR4	Q8N4T8	237 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	IL4I1	Q96RQ9	567 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	RAB40C	Q96S21	281 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	THTPA	Q9BU02	230 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	TM2D1	Q9BX74	207 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	SELENOI	Q9C0D9	397 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	OR51E2	Q9H255	320 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	MAGIX	Q9H6Y5	334 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	VSIR	Q9H7M9	311 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	TMEM138	Q9NPI0	162 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	TNFRSF18	Q9Y5U5	241 aa		4.23	□□□□□ -1.73
BBS4-218	ENST00000569440	IGHV3OR16-13	A0A075B7E8	117 aa		4.22	□□□□□ -1.73
BBS4-218	ENST00000569440	TRBV6-6	A0A0A6YYG2	114 aa		4.22	□□□□□ -1.73
BBS4-218	ENST00000569440	IGHV3-74	A0A0B4J1X5	117 aa		4.22	□□□□□ -1.73
BBS4-218	ENST00000569440	IGKV1-6	A0A0C4DH72	117 aa		4.22	□□□□□ -1.73
BBS4-218	ENST00000569440	CTSG	P08311	255 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms