RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 SAP30O75446 220 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 ECI1P42126 302 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 TAS2R19P59542 299 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 ATP5G2Q06055 141 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 PHLDA2Q53GA4 152 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 DEFB121Q5J5C9 76 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 ACSM6Q6P461 480 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 CADM3Q8N126 398 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 ISOC1Q96CN7 298 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 SRSF8Q9BRL6 282 aaKnown RBP15.29■□□□□ 0.04
CMTM3-211ENST00000565922 ELOVL1Q9BW60 279 aa15.29■□□□□ 0.04
CMTM3-211ENST00000565922 ANKRD34BA5PLL1 514 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 HMX3A6NHT5 357 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 H3BMQ9 156 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 M0QYG6 137 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 CTDSP2O14595 271 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 IL6RP08887 468 aaPredicted RBP15.28■□□□□ 0.04
CMTM3-211ENST00000565922 TATDN3Q17R31 274 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 TMEM229BQ8NBD8 167 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 ZNF486Q96H40 463 aaPredicted RBP15.28■□□□□ 0.04
CMTM3-211ENST00000565922 DIRAS2Q96HU8 199 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 OR4C12Q96R67 309 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 AKIP1Q9NQ31 210 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 SORL1Q92673 2214 aa15.28■□□□□ 0.04
CMTM3-211ENST00000565922 CD3DP04234 171 aa15.27■□□□□ 0.04
CMTM3-211ENST00000565922 CRYGCP07315 174 aa15.27■□□□□ 0.04
CMTM3-211ENST00000565922 HIST1H1BP16401 226 aaKnown RBP15.27■□□□□ 0.04
CMTM3-211ENST00000565922 PSMB6P28072 239 aa15.27■□□□□ 0.04
CMTM3-211ENST00000565922 LPAR6P43657 344 aa15.27■□□□□ 0.04
CMTM3-211ENST00000565922 ZNF45Q02386 682 aa15.27■□□□□ 0.04
CMTM3-211ENST00000565922 EXOSC2Q13868 293 aaKnown RBP15.27■□□□□ 0.04
CMTM3-211ENST00000565922 IL18Q14116 193 aa15.27■□□□□ 0.04
CMTM3-211ENST00000565922 HSD17B13Q7Z5P4 300 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-211ENST00000565922 OR6Q1Q8NGQ2 317 aa15.27■□□□□ 0.04
CMTM3-211ENST00000565922 C6orf62Q9GZU0 229 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-211ENST00000565922 ZNF256Q9Y2P7 627 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-211ENST00000565922 E7EUB6 86 aa15.26■□□□□ 0.03
CMTM3-211ENST00000565922 SNAPC5O75971 98 aa15.26■□□□□ 0.03
CMTM3-211ENST00000565922 PRH1P02810 166 aa15.26■□□□□ 0.03
CMTM3-211ENST00000565922 DEFA4P12838 97 aa15.26■□□□□ 0.03
CMTM3-211ENST00000565922 OR2B8PP59922 312 aa15.26■□□□□ 0.03
CMTM3-211ENST00000565922 DEFA5Q01523 94 aa15.26■□□□□ 0.03
CMTM3-211ENST00000565922 RPEL1Q2QD12 228 aa15.26■□□□□ 0.03
CMTM3-211ENST00000565922 TBC1D26Q86UD7 250 aa15.26■□□□□ 0.03
CMTM3-211ENST00000565922 SMIM4Q8WVI0 70 aa15.26■□□□□ 0.03
CMTM3-211ENST00000565922 TSC22D3Q99576 134 aa15.26■□□□□ 0.03
CMTM3-211ENST00000565922 CTDSPLO15194 276 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 CYB5BO43169 146 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 OR2J3O76001 311 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 RAB3DO95716 219 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 KRASP01116 189 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 CD74P04233 296 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 PGAM2P15259 253 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 CTRB1P17538 263 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 MEF2DQ14814 521 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 C15orf32Q32M92 178 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 CTRB2Q6GPI1 263 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 STEAP1BQ6NZ63 245 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 LHFPL1Q86WI0 220 aa15.25■□□□□ 0.03
CMTM3-211ENST00000565922 QTRT1Q9BXR0 403 aaKnown RBP15.25■□□□□ 0.03
CMTM3-211ENST00000565922 SLIRPQ9GZT3 109 aaKnown RBP15.25■□□□□ 0.03
CMTM3-211ENST00000565922 TRAV3A0A0B4J244 114 aa15.24■□□□□ 0.03
CMTM3-211ENST00000565922 CCDC160A6NGH7 325 aa15.24■□□□□ 0.03
CMTM3-211ENST00000565922 AREGP15514 252 aa15.24■□□□□ 0.03
CMTM3-211ENST00000565922 PTBP1P26599 531 aaKnown RBP eCLIP15.24■□□□□ 0.03
CMTM3-211ENST00000565922 RND3P61587 244 aa15.24■□□□□ 0.03
CMTM3-211ENST00000565922 ZNF585BQ52M93 769 aa15.24■□□□□ 0.03
CMTM3-211ENST00000565922 OR1L8Q8NGR8 309 aa15.24■□□□□ 0.03
CMTM3-211ENST00000565922 ZFAND1Q8TCF1 268 aa15.24■□□□□ 0.03
CMTM3-211ENST00000565922 FKBP11Q9NYL4 201 aa15.24■□□□□ 0.03
CMTM3-211ENST00000565922 FBXL7Q9UJT9 491 aa15.24■□□□□ 0.03
CMTM3-211ENST00000565922 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.23■□□□□ 0.03
CMTM3-211ENST00000565922 A0A1B0GW64 132 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 RBMXL2O75526 392 aaKnown RBP15.23■□□□□ 0.03
CMTM3-211ENST00000565922 LY86O95711 162 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 TRAPPC2P0DI81 140 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 TRAPPC2BP0DI82 140 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 RPA2P15927 270 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 G6PCP35575 357 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 KLF5Q13887 457 aaPredicted RBP15.23■□□□□ 0.03
CMTM3-211ENST00000565922 CCDC71LQ8N9Z2 235 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 OR9G4Q8NGQ1 327 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 TERB2Q8NHR7 220 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 MCFD2Q8NI22 146 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 PRR25Q96S07 402 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 THYN1Q9P016 225 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 RSL24D1Q9UHA3 163 aaKnown RBP15.23■□□□□ 0.03
CMTM3-211ENST00000565922 PRNDQ9UKY0 176 aa15.23■□□□□ 0.03
CMTM3-211ENST00000565922 IGLC7A0M8Q6 106 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 CGB1A6NKQ9 187 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 SERPINE2P07093 398 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 MYOD1P15172 320 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 PIGPP57054 158 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 KLK9Q2XQG4 91 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 SCGB2B2Q4G0G5 96 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 COPZ2Q9P299 210 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 PEMTQ9UBM1 199 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 KLK9Q9UKQ9 250 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 CEPT1Q9Y6K0 416 aa15.22■□□□□ 0.03
CMTM3-211ENST00000565922 DISC1C4P0D8 188 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms