RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 SLC25A42Q86VD7 318 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 ADAD2Q8NCV1 583 aaKnown RBP7.7□□□□□ -1.18
CDH1-206ENST00000564676 OR4D10Q8NGI6 311 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 RBM38Q9H0Z9 239 aaKnown RBP7.7□□□□□ -1.18
CDH1-206ENST00000564676 TMEM140Q9NV12 185 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 TRAV3A0A0B4J244 114 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 DISC1C4P0D8 188 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 LINC01619G3V211 115 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 ZNF701M0R085 212 aaPredicted RBP7.69□□□□□ -1.18
CDH1-206ENST00000564676 SNAPC5O75971 98 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 BRI3O95415 125 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 KRASP01116 189 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 PRH1P02810 166 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 HSPB1P04792 205 aaKnown RBP7.69□□□□□ -1.18
CDH1-206ENST00000564676 IL6RP08887 468 aaPredicted RBP7.69□□□□□ -1.18
CDH1-206ENST00000564676 MYOD1P15172 320 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 PI3P19957 117 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 HOXD3P31249 432 aaPredicted RBP7.69□□□□□ -1.18
CDH1-206ENST00000564676 G6PCP35575 357 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 PIGPP57054 158 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 DEFA5Q01523 94 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 FHL3Q13643 280 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 ZNF585BQ52M93 769 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 PDLIM3Q53GG5 364 aaPredicted RBP7.69□□□□□ -1.18
CDH1-206ENST00000564676 LHFPL1Q86WI0 220 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 TTC9CQ8N5M4 171 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 TERB2Q8NHR7 220 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 ZFAND1Q8TCF1 268 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 ZNF486Q96H40 463 aaPredicted RBP7.69□□□□□ -1.18
CDH1-206ENST00000564676 USMG5Q96IX5 58 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 SOSTQ9BQB4 213 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 COMMD5Q9GZQ3 224 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 SLC2A9Q9NRM0 540 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 COPZ2Q9P299 210 aa7.69□□□□□ -1.18
CDH1-206ENST00000564676 IGHV4OR15-8A0A075B7B6 117 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 A0A087WW49 117 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 ANKRD34BA5PLL1 514 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 MARCH11A6NNE9 402 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 SEC14L6B5MCN3 397 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 TEX22C9J3V5 150 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 E7EUB6 86 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 OVOL1O14753 267 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 GSTZ1O43708 216 aaPredicted RBP7.68□□□□□ -1.18
CDH1-206ENST00000564676 SERPINE2P07093 398 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 ZNF735P0CB33 412 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 AKAIN1P0CW23 69 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 SLURP1P55000 103 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 RND3P61587 244 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 RHOGP84095 191 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 ATP5G2Q06055 141 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 PYDC2Q56P42 97 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 C9orf66Q5T8R8 295 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 FAAP20Q6NZ36 180 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 REC114Q7Z4M0 266 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 CCDC71LQ8N9Z2 235 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 OR4C16Q8NGL9 310 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 DCUN1D4Q92564 292 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 RANGRFQ9HD47 186 aaPredicted RBP7.68□□□□□ -1.18
CDH1-206ENST00000564676 FAM212BQ9NTI7 297 aaPredicted RBP7.68□□□□□ -1.18
CDH1-206ENST00000564676 ZNF257Q9Y2Q1 563 aa7.68□□□□□ -1.18
CDH1-206ENST00000564676 ANKRD20A5PA0PJZ0 165 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 FAM223BA6NKX1 122 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 NPIPB5A8MRT5 1133 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 OR2J3O76001 311 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 DHFRP00374 187 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 CTSDP07339 412 aaPredicted RBP7.67□□□□□ -1.18
CDH1-206ENST00000564676 DEFA4P12838 97 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 AREGP15514 252 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 ZP3P21754 424 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 PSMB6P28072 239 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 ECI1P42126 302 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 OR2B8PP59922 312 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 H2BFWTQ7Z2G1 175 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 FAM223AQ8IWN6 122 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 OR1L8Q8NGR8 309 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 OR13C8Q8NGS7 320 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 MARCH1Q8TCQ1 289 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 DLX4Q92988 240 aaPredicted RBP7.67□□□□□ -1.18
CDH1-206ENST00000564676 PRRT1Q99946 306 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 THAP7Q9BT49 309 aaPredicted RBP7.67□□□□□ -1.18
CDH1-206ENST00000564676 HINT2Q9BX68 163 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 MCUBQ9NWR8 336 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 AURKAIP1Q9NWT8 199 aaPredicted RBP7.67□□□□□ -1.18
CDH1-206ENST00000564676 NDUFA13Q9P0J0 144 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 C14orf166Q9Y224 244 aaKnown RBP7.67□□□□□ -1.18
CDH1-206ENST00000564676 NSG2Q9Y328 171 aa7.67□□□□□ -1.18
CDH1-206ENST00000564676 TRBV9A0A0B4J1U6 114 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 A0A1B0GW64 132 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 H0Y980 276 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 RBMXL2O75526 392 aaKnown RBP7.66□□□□□ -1.18
CDH1-206ENST00000564676 REG1AP05451 166 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 CRYGCP07315 174 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 TRAPPC2P0DI81 140 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 TRAPPC2BP0DI82 140 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 PTBP1P26599 531 aaKnown RBP eCLIP7.66□□□□□ -1.18
CDH1-206ENST00000564676 KRTAP10-11P60412 298 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 ZNF45Q02386 682 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 THOC7Q6I9Y2 204 aaKnown RBP7.66□□□□□ -1.18
CDH1-206ENST00000564676 ZNF343Q6P1L6 599 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 CADM3Q8N126 398 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms