RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 UCP1P25874 307 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 OPRK1P41145 380 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 RHOBP62745 196 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 PAFAH1B2P68402 229 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 ACY3Q96HD9 319 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 ESPL1Q14674 2120 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 YPEL1O60688 119 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 TNFSF13O75888 250 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 OR2A4O95047 310 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 SEC11BP0C7V7 166 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 SLC25A6P12236 298 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 RPL27AP46776 148 aaKnown RBP6.35□□□□□ -1.39
TCF4-216ENST00000562680 C12orf54Q6X4T0 127 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 OSR1Q8TAX0 266 aaPredicted RBP6.35□□□□□ -1.39
TCF4-216ENST00000562680 TMEM37Q8WXS4 190 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 YPEL2Q96QA6 119 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 OR2A7Q96R45 310 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 CHRDL1Q9BU40 450 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 REG4Q9BYZ8 158 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 WSB1Q9Y6I7 421 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 CEP192Q8TEP8 1941 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 CUL9Q8IWT3 2517 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 RTTNQ86VV8 2226 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 ZNHIT1O43257 154 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 EWSR1Q01844 656 aaKnown RBP eCLIP6.35□□□□□ -1.39
TCF4-216ENST00000562680 MMDQ15546 238 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 ZNF660Q6AZW8 331 aaPredicted RBP6.35□□□□□ -1.39
TCF4-216ENST00000562680 ZNF497Q6ZNH5 498 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 ABHD12Q8N2K0 398 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 DRAM1Q8N682 238 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 OR4C13Q8NGP0 309 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 ZNF524Q96C55 264 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 GEMIN7Q9H840 131 aaKnown RBP6.35□□□□□ -1.39
TCF4-216ENST00000562680 DIDO1Q9BTC0 2240 aaKnown RBP6.35□□□□□ -1.39
TCF4-216ENST00000562680 J3QR06 171 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 ESDP10768 282 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 AGAP20933 346 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 PAX2Q02962 417 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 TMEM187Q14656 261 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 PCSK4Q6UW60 755 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 Q6ZS49 121 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 CLUHP3Q96NS8 147 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 RCC2Q9P258 522 aaKnown RBP6.34□□□□□ -1.39
TCF4-216ENST00000562680 VAX2Q9UIW0 290 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 CDC42EP3Q9UKI2 254 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 H0YL77 283 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 PITX3O75364 302 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 WT1P19544 449 aaPredicted RBP6.34□□□□□ -1.39
TCF4-216ENST00000562680 LCN15Q6UWW0 184 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 RSG1Q9BU20 258 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 CST9LQ9H4G1 147 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 RBFOX2O43251 390 aaKnown RBP eCLIP6.34□□□□□ -1.39
TCF4-216ENST00000562680 IGLV1-44P01699 117 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 THBDP07204 575 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 G6PCP35575 357 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 SPATA45Q537H7 98 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 ACSM6Q6P461 480 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 MRAP2Q96G30 205 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 ADAMTS9Q9P2N4 1935 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 ZNF318Q5VUA4 2279 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 G3V3Q6 166 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 TRGC2P03986 189 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 HSPE1P61604 102 aaKnown RBP6.34□□□□□ -1.39
TCF4-216ENST00000562680 RPL8P62917 257 aaKnown RBP6.34□□□□□ -1.39
TCF4-216ENST00000562680 DNM1P46Q6ZS02 220 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 LRP11Q86VZ4 500 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 ZNRF1Q8ND25 227 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 OR11H4Q8NGC9 324 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 GRAMD2BQ96HH9 432 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 GNB4Q9HAV0 340 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 HIF1ANQ9NWT6 349 aa6.34□□□□□ -1.39
TCF4-216ENST00000562680 MYO7BQ6PIF6 2116 aa6.34□□□□□ -1.4
TCF4-216ENST00000562680 CD8AP01732 235 aa6.34□□□□□ -1.4
TCF4-216ENST00000562680 IGHV3-7P01780 117 aa6.34□□□□□ -1.4
TCF4-216ENST00000562680 MGST1P10620 155 aaKnown RBP6.34□□□□□ -1.4
TCF4-216ENST00000562680 HLA-GP17693 338 aa6.34□□□□□ -1.4
TCF4-216ENST00000562680 PPOXP50336 477 aa6.34□□□□□ -1.4
TCF4-216ENST00000562680 SSBP3Q9BWW4 388 aaPredicted RBP6.34□□□□□ -1.4
TCF4-216ENST00000562680 SNHG12Q9BXW3 62 aa6.34□□□□□ -1.4
TCF4-216ENST00000562680 OR1A1Q9P1Q5 309 aa6.34□□□□□ -1.4
TCF4-216ENST00000562680 OR51B2Q9Y5P1 312 aa6.34□□□□□ -1.4
TCF4-216ENST00000562680 TRAV24A0A0B4J272 114 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 IGKV1-12A0A0C4DH73 117 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 DEDDO75618 318 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 IGKV1D-12P01611 117 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 SERF2P84101 59 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 TMEM249Q2WGJ8 235 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 PDPNQ86YL7 162 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 FGFRL1Q8N441 504 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 VN1R17PQ8TDU5 208 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 FAM215AQ9Y5M1 114 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 TRAPPC1Q9Y5R8 145 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 ICE1Q9Y2F5 2266 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 ZG16O60844 167 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 TGFAP01135 160 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 UBE2G1P62253 170 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 FAM71F2Q6NXP2 309 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 WDFY1Q8IWB7 410 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 FAM216BQ8N7L0 139 aa6.33□□□□□ -1.4
TCF4-216ENST00000562680 OR5AU1Q8NGC0 362 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms