RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 GVQW1Q8N7I0 195 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 OR5H6Q8NGV6 325 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 OR51H1Q8NH63 302 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 SRSF8Q9BRL6 282 aaKnown RBP9.54□□□□□ -0.88
SNX1-209ENST00000559961 EHFQ9NZC4 300 aa9.54□□□□□ -0.88
SNX1-209ENST00000559961 IZUMO1RA6ND01 250 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 XRCC3O43542 346 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 RBMXL2O75526 392 aaKnown RBP9.53□□□□□ -0.88
SNX1-209ENST00000559961 NDUFB8O95169 186 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 IGHV3-23P01764 117 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 HLA-AP01891 365 aaKnown RBP9.53□□□□□ -0.88
SNX1-209ENST00000559961 CLEC3BP05452 202 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 FCER2P06734 321 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 CBLN1P23435 193 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 TAS2R46P59540 309 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 UBE2NLQ5JXB2 153 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 TMEM69Q5SWH9 247 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 PLET1Q6UQ28 207 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 SLC38A6Q8IZM9 456 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 OR52B4Q8NGK2 314 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 OR5H2Q8NGV7 314 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 MARC2Q969Z3 335 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 SRD5A3Q9H8P0 318 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 PLEKHA2Q9HB19 425 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 UFC1Q9Y3C8 167 aa9.53□□□□□ -0.88
SNX1-209ENST00000559961 UPK2O00526 184 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 REG1AP05451 166 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 TRAPPC2P0DI81 140 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 TRAPPC2BP0DI82 140 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 MYOD1P15172 320 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 AREGP15514 252 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 CTRB1P17538 263 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 MECP2P51608 486 aaKnown RBP9.52□□□□□ -0.89
SNX1-209ENST00000559961 TSPAN5P62079 268 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 KCTD21Q4G0X4 260 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 CTRB2Q6GPI1 263 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 LAMTOR1Q6IAA8 161 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 SLC25A24Q6NUK1 477 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 LPCAT3Q6P1A2 487 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 NBEAL2Q6ZNJ1 2754 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 OR6F1Q8NGZ6 308 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 SLC25A38Q96DW6 304 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 GPHA2Q96T91 129 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 HINT2Q9BX68 163 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 QTRT1Q9BXR0 403 aaKnown RBP9.52□□□□□ -0.89
SNX1-209ENST00000559961 RNF167Q9H6Y7 350 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 FKBP11Q9NYL4 201 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 COMMD9Q9P000 198 aa9.52□□□□□ -0.89
SNX1-209ENST00000559961 MEIS3P1A6NDR6 274 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 JTBO76095 146 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 FGF2P09038 288 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 PTHLHP12272 177 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 PRSS3P35030 304 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 OR2B8PP59922 312 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 EIF4EBP1Q13541 118 aaPredicted RBP9.51□□□□□ -0.89
SNX1-209ENST00000559961 ZNF818PQ6ZRF7 136 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 DEFB125Q8N687 156 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 SAMD12Q8N8I0 201 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 UXS1Q8NBZ7 420 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 OR1L6Q8NGR2 347 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 OR1L8Q8NGR8 309 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 TMEM56Q96MV1 263 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 FANCD2OSQ96PS1 177 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 ZNF2Q9BSG1 426 aaPredicted RBP9.51□□□□□ -0.89
SNX1-209ENST00000559961 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 S4R3C0 116 aa9.51□□□□□ -0.89
SNX1-209ENST00000559961 KMT2CQ8NEZ4 4911 aaKnown RBP9.51□□□□□ -0.89
SNX1-209ENST00000559961 IGLV11-55A0A075B6I3 123 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 A0A087WXM4 84 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 ZNF785A8K8V0 405 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 PMP2P02689 132 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 OR13C7P0DN81 318 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 F2RP25116 425 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 PTBP1P26599 531 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNX1-209ENST00000559961 GPR183P32249 361 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 ELLP55199 621 aaPredicted RBP9.5□□□□□ -0.89
SNX1-209ENST00000559961 POU2AF1Q16633 256 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 ZNF585BQ52M93 769 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 DHRS11Q6UWP2 260 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 VN1R17PQ8TDU5 208 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 WDR89Q96FK6 387 aaPredicted RBP9.5□□□□□ -0.89
SNX1-209ENST00000559961 TSC22D3Q99576 134 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 THAP7Q9BT49 309 aaPredicted RBP9.5□□□□□ -0.89
SNX1-209ENST00000559961 EDA2RQ9HAV5 297 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 ZC4H2Q9NQZ6 224 aa9.5□□□□□ -0.89
SNX1-209ENST00000559961 GAR1Q9NY12 217 aaKnown RBP9.5□□□□□ -0.89
SNX1-209ENST00000559961 MRPL27Q9P0M9 148 aaKnown RBP9.5□□□□□ -0.89
SNX1-209ENST00000559961 MARCH11A6NNE9 402 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 E7EUB6 86 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 GPR31O00270 319 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 S1PR2O95136 353 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 RLN1P04808 185 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 CD7P09564 240 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 RPA2P15927 270 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 LPAR6P43657 344 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 RFX2P48378 723 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 BRWD1-AS2P59051 145 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 C19orf35Q6ZS72 473 aa9.49□□□□□ -0.89
SNX1-209ENST00000559961 DGCR14Q96DF8 476 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms