RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 WT1P19544 449 aaPredicted RBP13.65□□□□□ -0.22
SPG11-215ENST00000559193 GCHFRP30047 84 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 SSX2Q16385 188 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 TCF23Q7RTU1 214 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 MRPL41Q8IXM3 137 aaKnown RBP13.65□□□□□ -0.22
SPG11-215ENST00000559193 STPG3Q8N7X2 389 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 OCC1Q8TAD7 63 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 LOC400499M0QZD8 3231 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 TRAV17A0A0B4J275 112 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 CCKARP32238 428 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 TIMP3P35625 211 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 EFNB3Q15768 340 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 CT45A1Q5HYN5 189 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 ALKBH2Q6NS38 261 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 CT45A3Q8NHU0 189 aa13.65□□□□□ -0.22
SPG11-215ENST00000559193 SAA2-SAA4A0A096LPE2 208 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 SAA2P0DJI9 122 aaPredicted RBP13.64□□□□□ -0.23
SPG11-215ENST00000559193 NPY1RP25929 384 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 ZNF83P51522 516 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 FAM201AQ5SY85 155 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 OR4A47Q6IF82 309 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 TEX38Q6PEX7 206 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 FAM169BQ8N8A8 192 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 SLC24A4Q8NFF2 622 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 TEPPQ6URK8 271 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 SEM1Q6ZVN7 128 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 TMEM256Q8N2U0 113 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 TMEM14BQ9NUH8 114 aa13.64□□□□□ -0.23
SPG11-215ENST00000559193 FOXA2Q9Y261 457 aaPredicted RBP13.64□□□□□ -0.23
SPG11-215ENST00000559193 LHBP01229 141 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 OR4A8P0C604 315 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 MYOD1P15172 320 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 RAB7AP51149 207 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 DUX4L9Q6RFH8 374 aaPredicted RBP13.63□□□□□ -0.23
SPG11-215ENST00000559193 CHODLQ9H9P2 273 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 K7EN84 100 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 ITGB1BP1O14713 200 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 NUPR1O60356 82 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 FOXH1O75593 365 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 CA2P00918 260 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 ADMP35318 185 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 THBS3P49746 956 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 OR10G8Q8NGN5 311 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 ITLN1Q8WWA0 313 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 IDI2-AS1Q9NZ38 188 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 NBEAQ8NFP9 2946 aa13.63□□□□□ -0.23
SPG11-215ENST00000559193 INTS1Q8N201 2190 aaKnown RBP13.62□□□□□ -0.23
SPG11-215ENST00000559193 AHRRA9YTQ3 701 aa13.62□□□□□ -0.23
SPG11-215ENST00000559193 SPRY3O43610 288 aa13.62□□□□□ -0.23
SPG11-215ENST00000559193 SNRPCP09234 159 aaKnown RBP13.62□□□□□ -0.23
SPG11-215ENST00000559193 HSPE1P61604 102 aaKnown RBP13.62□□□□□ -0.23
SPG11-215ENST00000559193 RHOBP62745 196 aa13.62□□□□□ -0.23
SPG11-215ENST00000559193 RPL31P62899 125 aaKnown RBP13.62□□□□□ -0.23
SPG11-215ENST00000559193 NDUFAF3Q9BU61 184 aa13.62□□□□□ -0.23
SPG11-215ENST00000559193 M0R1B8 84 aa13.62□□□□□ -0.23
SPG11-215ENST00000559193 RNF224P0DH78 156 aa13.62□□□□□ -0.23
SPG11-215ENST00000559193 RPL29P47914 159 aaKnown RBP13.62□□□□□ -0.23
SPG11-215ENST00000559193 YPEL3P61236 119 aaPredicted RBP13.62□□□□□ -0.23
SPG11-215ENST00000559193 HLA-DRB5Q30154 266 aa13.62□□□□□ -0.23
SPG11-215ENST00000559193 C11orf52Q96A22 123 aa13.62□□□□□ -0.23
SPG11-215ENST00000559193 PCNX2A6NKB5 2137 aa13.62□□□□□ -0.23
SPG11-215ENST00000559193 DSPP15924 2871 aaKnown RBP13.61□□□□□ -0.23
SPG11-215ENST00000559193 IGFBP2P18065 325 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 PRR20EP86478 221 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 PRR20CP86479 221 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 PRR20DP86480 221 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 PRR20BP86481 221 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 PRR20AP86496 221 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 IQCJQ1A5X6 159 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.61□□□□□ -0.23
SPG11-215ENST00000559193 MISP3Q96FF7 219 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 KBTBD11-OT1A0A1B0GTJ5 212 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 KLF3P57682 345 aaPredicted RBP13.61□□□□□ -0.23
SPG11-215ENST00000559193 VHLLQ6RSH7 139 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 C2orf88Q9BSF0 95 aa13.61□□□□□ -0.23
SPG11-215ENST00000559193 HEATR1Q9H583 2144 aaKnown RBP13.61□□□□□ -0.23
SPG11-215ENST00000559193 ZFHX4Q86UP3 3567 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 NDUFB7P17568 137 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 ZNF439Q8NDP4 499 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 OR4P4Q8NGL7 312 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 NEUROG1Q92886 237 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 NCOR1P1Q9H4R4 102 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 ENY2Q9NPA8 101 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 MBD3L4A6NDZ8 208 aaPredicted RBP13.6□□□□□ -0.23
SPG11-215ENST00000559193 MBD3L3A6NE82 208 aaPredicted RBP13.6□□□□□ -0.23
SPG11-215ENST00000559193 MBD3L5A6NJ08 208 aaPredicted RBP13.6□□□□□ -0.23
SPG11-215ENST00000559193 SLC17A3O00476 420 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 LINC00869P0C866 280 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 RAB4BP61018 213 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 MRPS11P82912 194 aaKnown RBP13.6□□□□□ -0.23
SPG11-215ENST00000559193 LYG1Q8N1E2 194 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 BEND2Q8NDZ0 799 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 MBD3L2Q8NHZ7 208 aaPredicted RBP13.6□□□□□ -0.23
SPG11-215ENST00000559193 HINT2Q9BX68 163 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 FKBP11Q9NYL4 201 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 IL36BQ9NZH7 164 aa13.6□□□□□ -0.23
SPG11-215ENST00000559193 TAS2R60P59551 318 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 MIR17HGQ75NE6 70 aa13.59□□□□□ -0.23
SPG11-215ENST00000559193 DMRTC2Q8IXT2 367 aaPredicted RBP13.59□□□□□ -0.23
SPG11-215ENST00000559193 FAM222BQ8WU58 562 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms