RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PRRT1Q99946 306 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 TINAGL1Q9GZM7 467 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-223ENST00000557511 FAM212BQ9NTI7 297 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-223ENST00000557511 BET1LQ9NYM9 111 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 FBXO7Q9Y3I1 522 aa6.5□□□□□ -1.37
PSEN1-223ENST00000557511 FBN3Q75N90 2809 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 MARCH11A6NNE9 402 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 LINC01619G3V211 115 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 GSTZ1O43708 216 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 RAMP3O60896 148 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 RBMXL2O75526 392 aaKnown RBP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 B3GALNT1O75752 331 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 S1PR2O95136 353 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 CD74P04233 296 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 LGALS1P09382 135 aaKnown RBP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 APELAP0DMC3 54 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 EGR2P11161 476 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 DEFA4P12838 97 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 RPA2P15927 270 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 PTBP1P26599 531 aaKnown RBP eCLIP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 DEFA6Q01524 100 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 ZNF616Q08AN1 781 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 TATDN3Q17R31 274 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 FAM209BQ5JX69 171 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 THOC7Q6I9Y2 204 aaKnown RBP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 OR4A47Q6IF82 309 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 H2BFWTQ7Z2G1 175 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 HSD17B13Q7Z5P4 300 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 PUSL1Q8N0Z8 303 aaKnown RBP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 TOMM5Q8N4H5 51 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 WFDC9Q8NEX5 89 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 RNASE11Q8TAA1 199 aaKnown RBP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 USMG5Q96IX5 58 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 THAP7Q9BT49 309 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 NXF2Q9GZY0 626 aaKnown RBP6.49□□□□□ -1.37
PSEN1-223ENST00000557511 KLK15Q9H2R5 256 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 SLC2A9Q9NRM0 540 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 TMEM140Q9NV12 185 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 MCUBQ9NWR8 336 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 FKBP11Q9NYL4 201 aa6.49□□□□□ -1.37
PSEN1-223ENST00000557511 TEX13DA0A0J9YY54 714 aaPredicted RBP6.48□□□□□ -1.37
PSEN1-223ENST00000557511 FAM223BA6NKX1 122 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 G3V4G9 280 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 UPK2O00526 184 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 KRASP01116 189 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 IGHV3-11P01762 117 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 CTSDP07339 412 aaPredicted RBP6.48□□□□□ -1.37
PSEN1-223ENST00000557511 IGLL1P15814 213 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 HIST1H1BP16401 226 aaKnown RBP6.48□□□□□ -1.37
PSEN1-223ENST00000557511 ZP3P21754 424 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 MECP2P51608 486 aaKnown RBP6.48□□□□□ -1.37
PSEN1-223ENST00000557511 AKR1C2P52895 323 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 PIGPP57054 158 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 RND3P61587 244 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 RUNX1Q01196 453 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 ATP5G2Q06055 141 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 SURF2Q15527 256 aaPredicted RBP6.48□□□□□ -1.37
PSEN1-223ENST00000557511 TRIM16LQ309B1 348 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 DEFB136Q30KP8 78 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 C18orf65Q6ZTR6 163 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 C1QL4Q86Z23 238 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 FAM223AQ8IWN6 122 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 Q8N402 240 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 LINC00482Q8N8I6 264 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 OR4A16Q8NH70 328 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 RRNAD1Q96FB5 475 aaKnown RBP6.48□□□□□ -1.37
PSEN1-223ENST00000557511 RAX2Q96IS3 184 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 TMEM56Q96MV1 263 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 DUX3Q96PT4 197 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 P2RX4Q99571 388 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 PDCD10Q9BUL8 212 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 HINT2Q9BX68 163 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 RBM38Q9H0Z9 239 aaKnown RBP6.48□□□□□ -1.37
PSEN1-223ENST00000557511 GNB4Q9HAV0 340 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 RANGRFQ9HD47 186 aaPredicted RBP6.48□□□□□ -1.37
PSEN1-223ENST00000557511 THYN1Q9P016 225 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 PRNDQ9UKY0 176 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 ZNF257Q9Y2Q1 563 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 KCNIP3Q9Y2W7 256 aa6.48□□□□□ -1.37
PSEN1-223ENST00000557511 PIGBOS1A0A0B4J2F0 54 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 C3orf85A0A1B0GTC6 90 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 ANKRD20A5PA0PJZ0 165 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 H0Y980 276 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 I3L521 148 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 SOX15O60248 233 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 BRI3O95415 125 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 HSPB1P04792 205 aaKnown RBP6.47□□□□□ -1.37
PSEN1-223ENST00000557511 FGF2P09038 288 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 TRAPPC2P0DI81 140 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 TRAPPC2BP0DI82 140 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 ANXA3P12429 323 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 PI3P19957 117 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 G6PCP35575 357 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 POU2AF1Q16633 256 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 C19orf54Q5BKX5 351 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 C9orf66Q5T8R8 295 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 TRIQKQ629K1 86 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 ZNF57Q68EA5 555 aaPredicted RBP6.47□□□□□ -1.37
PSEN1-223ENST00000557511 LHFPL1Q86WI0 220 aa6.47□□□□□ -1.37
PSEN1-223ENST00000557511 SGPP2Q8IWX5 399 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms