RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SNAPC5O75971 98 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 KBTBD11O94819 623 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 OR2F2O95006 317 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 FSHBP01225 129 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 TMEM11P17152 192 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 BRS3P32247 399 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 ARHGDIBP52566 201 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 UBE2KP61086 200 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 FGL1Q08830 312 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 DEFB112Q30KQ8 113 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 VMA21Q3ZAQ7 101 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 OR2T10Q8NGZ9 312 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 THAP6Q8TBB0 222 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 PIFOQ8TCI5 191 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 ZDHHC16Q969W1 377 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 SSX3Q99909 188 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 MEGF9Q9H1U4 602 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 YAE1D1Q9NRH1 226 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 COA4Q9NYJ1 87 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 BET1LQ9NYM9 111 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 METTL1Q9UBP6 276 aaKnown RBP8.16□□□□□ -1.1
SRP54-208ENST00000555557 POMT1Q9Y6A1 747 aa8.16□□□□□ -1.1
SRP54-208ENST00000555557 SONP18583 2426 aaKnown RBP8.16□□□□□ -1.1
SRP54-208ENST00000555557 C15orf61A6NNL5 157 aa8.15□□□□□ -1.1
SRP54-208ENST00000555557 NCBP2LA6PVI3 153 aaKnown RBP8.15□□□□□ -1.1
SRP54-208ENST00000555557 DEDDO75618 318 aa8.15□□□□□ -1.1
SRP54-208ENST00000555557 IFNA17P01571 189 aa8.15□□□□□ -1.1
SRP54-208ENST00000555557 FBP1P09467 338 aa8.15□□□□□ -1.1
SRP54-208ENST00000555557 FAM106CPP0CH98 169 aa8.15□□□□□ -1.1
SRP54-208ENST00000555557 MRGPRG-AS1Q2M3A8 158 aa8.15□□□□□ -1.1
SRP54-208ENST00000555557 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
SRP54-208ENST00000555557 DCUN1D4Q92564 292 aa8.15□□□□□ -1.1
SRP54-208ENST00000555557 TSNAXQ99598 290 aaKnown RBP8.15□□□□□ -1.1
SRP54-208ENST00000555557 ZNF430Q9H8G1 570 aaPredicted RBP8.15□□□□□ -1.1
SRP54-208ENST00000555557 TNCP24821 2201 aa8.15□□□□□ -1.1
SRP54-208ENST00000555557 E7EUB6 86 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 WRBO00258 174 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 FCN1O00602 326 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 NBR2O15453 112 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 ARPC5O15511 151 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 TMEM50AO95807 157 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 RLN2P04090 185 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 CRYGBP07316 175 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 IAPPP10997 89 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 TNFRSF9Q07011 255 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 EBI3Q14213 229 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 PLGLAQ15195 96 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 C10orf55Q5SWW7 151 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 PRSS54Q6PEW0 395 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 ZNF546Q86UE3 836 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 TMEM219Q86XT9 240 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 Q8N6K4 173 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 VSTM2AQ8TAG5 236 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 TMEM167AQ8TBQ9 72 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 RNF5Q99942 180 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 RBKSQ9H477 322 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 TMEM14BQ9NUH8 114 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 HSPB7Q9UBY9 170 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 SIGLEC9Q9Y336 463 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 OR51B2Q9Y5P1 312 aa8.15□□□□□ -1.11
SRP54-208ENST00000555557 TEX50A0A1B0GTY4 177 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 RPS10-NUDT3A0A1W2PQS6 291 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 H3BUX3 64 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 RRHO14718 337 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 SYNGR2O43760 224 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 SLC25A4P12235 298 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 ZP3P21754 424 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 BPIFB3P59826 476 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 RPL8P62917 257 aaKnown RBP8.14□□□□□ -1.11
SRP54-208ENST00000555557 LY6EQ16553 131 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 SPNS3Q6ZMD2 512 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 ZNF429Q86V71 674 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 TEX45Q8NA69 505 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 NPBQ8NG41 125 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 HINT2Q9BX68 163 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 FOXA2Q9Y261 457 aaPredicted RBP8.14□□□□□ -1.11
SRP54-208ENST00000555557 PLXNB1O43157 2135 aa8.14□□□□□ -1.11
SRP54-208ENST00000555557 MSGN1A6NI15 193 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 PCP4L1A6NKN8 68 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 CEBPZOSA8MTT3 80 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 H3BP45 60 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 PET100P0DJ07 73 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 CXCL2P19875 107 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 PAX9P55771 341 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 GNB1P62873 340 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 PRSS8Q16651 343 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 LGALSLQ3ZCW2 172 aaPredicted RBP8.13□□□□□ -1.11
SRP54-208ENST00000555557 AARDQ4LEZ3 155 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 CLEC9AQ6UXN8 241 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 PPP1R27Q86WC6 154 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 THNSL2Q86YJ6 484 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 OR4A5Q8NH83 315 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 ZNF48Q96MX3 618 aaPredicted RBP8.13□□□□□ -1.11
SRP54-208ENST00000555557 TNFRSF19Q9NS68 423 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 KIAA1456Q9P272 454 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 PRNDQ9UKY0 176 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 TCF19Q9Y242 345 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 FAM24AA6NFZ4 105 aa8.13□□□□□ -1.11
SRP54-208ENST00000555557 SH2D7A6NKC9 451 aaPredicted RBP8.13□□□□□ -1.11
SRP54-208ENST00000555557 FAM90A26D6RGX4 464 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms