RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 OR4D1Q15615 310 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 CLEC12BQ2HXU8 276 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 SPINK6Q6UWN8 80 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 GRINAQ7Z429 371 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 LINC00311Q8N616 119 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 OR1M1Q8NGA1 313 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 OR5AK3PQ8NH89 298 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 STOML3Q8TAV4 291 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 GNPNAT1Q96EK6 184 aaPredicted RBP-0.2□□□□□ -2.44
SNX6-204ENST00000555541 SERPINB11Q96P15 392 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 CCL13Q99616 98 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 NABP2Q9BQ15 211 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 BCL7BQ9BQE9 202 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 SLC50A1Q9BRV3 221 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 NSRP1Q9H0G5 558 aaKnown RBP-0.2□□□□□ -2.44
SNX6-204ENST00000555541 KIAA0232Q92628 1395 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 COL7A1Q02388 2944 aa-0.2□□□□□ -2.44
SNX6-204ENST00000555541 TNRC6AQ8NDV7 1962 aaKnown RBP-0.21□□□□□ -2.44
SNX6-204ENST00000555541 M0R2N4 97 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 SYNGR1O43759 233 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 OR1I1O60431 355 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 ADAP1O75689 374 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 DNAL4O96015 105 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 IGHV3-7P01780 117 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 TPM2P07951 284 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 SFTPCP11686 197 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 FKBP2P26885 142 aaKnown RBP-0.21□□□□□ -2.44
SNX6-204ENST00000555541 NUP62P37198 522 aaPredicted RBP-0.21□□□□□ -2.44
SNX6-204ENST00000555541 JOSD1Q15040 202 aaPredicted RBP-0.21□□□□□ -2.44
SNX6-204ENST00000555541 DNAL1Q4LDG9 190 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 LCN15Q6UWW0 184 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 ST13P4Q8IZP2 240 aaPredicted RBP-0.21□□□□□ -2.44
SNX6-204ENST00000555541 BLIDQ8IZY5 108 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 OR2T27Q8NH04 317 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 OR10D3Q8NH80 312 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 RNASEH2CQ8TDP1 164 aaKnown RBP-0.21□□□□□ -2.44
SNX6-204ENST00000555541 C11orf40Q8WZ69 217 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 RORBQ92753 470 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 PPCDCQ96CD2 204 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 CCDC124Q96CT7 223 aaKnown RBP-0.21□□□□□ -2.44
SNX6-204ENST00000555541 OPTNQ96CV9 577 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 ANKRD36BP1Q96IX9 119 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 TIPINQ9BVW5 301 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 NDEL1Q9GZM8 345 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 CXorf21Q9HAI6 301 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 HRASLSQ9HDD0 168 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 ASCL3Q9NQ33 180 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 CDC42SE1Q9NRR8 79 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 TMEM94Q12767 1356 aa-0.21□□□□□ -2.44
SNX6-204ENST00000555541 C2orf70A6NJV1 201 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 AZIN1O14977 448 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 INE1O15225 51 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 NEMFO60524 1076 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 APOMO95445 188 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 YEATS4O95619 227 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 ATP6V1G2O95670 118 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 SLC35E2BP0CK96 405 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 SYT1P21579 422 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 RPS4Y1P22090 263 aaKnown RBP-0.22□□□□□ -2.44
SNX6-204ENST00000555541 MIPP30301 263 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 CNBPP62633 177 aaKnown RBP-0.22□□□□□ -2.44
SNX6-204ENST00000555541 STX3Q13277 289 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 MPV17LQ2QL34 196 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 RBM48Q5RL73 367 aaKnown RBP-0.22□□□□□ -2.44
SNX6-204ENST00000555541 PHF13Q86YI8 300 aaPredicted RBP-0.22□□□□□ -2.44
SNX6-204ENST00000555541 EXOC3-AS1Q8N2X6 119 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 OR52E4Q8NGH9 312 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 TMEM106AQ96A25 262 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 CYTH2Q99418 400 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 GPR84Q9NQS5 396 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 RABL2AQ9UBK7 228 aaPredicted RBP-0.22□□□□□ -2.44
SNX6-204ENST00000555541 FUT9Q9Y231 359 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 THSD7AQ9UPZ6 1657 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 MAP3K19Q56UN5 1328 aa-0.22□□□□□ -2.44
SNX6-204ENST00000555541 TNCP24821 2201 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 GOLGA6L19H0YKK7 550 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 STX10O60499 249 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 NOS1APO75052 506 aaPredicted RBP-0.23□□□□□ -2.45
SNX6-204ENST00000555541 HMMRO75330 724 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 FADS2O95864 444 aaKnown RBP-0.23□□□□□ -2.45
SNX6-204ENST00000555541 IL6P05231 212 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 SPI1P17947 270 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 POLR2GP62487 172 aaKnown RBP eCLIP-0.23□□□□□ -2.45
SNX6-204ENST00000555541 RPL18Q07020 188 aaKnown RBP-0.23□□□□□ -2.45
SNX6-204ENST00000555541 EBPQ15125 230 aaKnown RBP-0.23□□□□□ -2.45
SNX6-204ENST00000555541 LPCAT4Q643R3 524 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 TEX261Q6UWH6 196 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 ZNF550Q7Z398 422 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 UBL4BQ8N7F7 174 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 OR4D11Q8NGI4 311 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 RBP7Q96R05 134 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 GINS4Q9BRT9 223 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 TMEM147Q9BVK8 224 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 BBS2Q9BXC9 721 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 SLC22A4Q9H015 551 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 WDR54Q9H977 334 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 PAQR5Q9NXK6 330 aaPredicted RBP-0.23□□□□□ -2.45
SNX6-204ENST00000555541 RASL12Q9NYN1 266 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 TAS2R4Q9NYW5 299 aa-0.23□□□□□ -2.45
SNX6-204ENST00000555541 RSL24D1Q9UHA3 163 aaKnown RBP-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms