RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 RNF115Q9Y4L5 304 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 KIR2DL5BA0A0G2JN68 375 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 KIR2DL5BA0A0G2JPC4 375 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 RBMXL2O75526 392 aaKnown RBP9.65□□□□□ -0.86
SHMT2-212ENST00000554467 HSPB1P04792 205 aaKnown RBP9.65□□□□□ -0.86
SHMT2-212ENST00000554467 TDRG1Q3Y452 100 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 KIR2DL5AQ8N109 375 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 DYNLRB1Q9NP97 96 aa9.65□□□□□ -0.86
SHMT2-212ENST00000554467 HCFC1P51610 2035 aa9.65□□□□□ -0.87
SHMT2-212ENST00000554467 BRS3P32247 399 aa9.65□□□□□ -0.87
SHMT2-212ENST00000554467 CA7P43166 264 aa9.65□□□□□ -0.87
SHMT2-212ENST00000554467 GPR12P47775 334 aa9.65□□□□□ -0.87
SHMT2-212ENST00000554467 PDLIM4P50479 330 aa9.65□□□□□ -0.87
SHMT2-212ENST00000554467 RAB11AP62491 216 aa9.65□□□□□ -0.87
SHMT2-212ENST00000554467 AARDQ4LEZ3 155 aa9.65□□□□□ -0.87
SHMT2-212ENST00000554467 MORN2Q502X0 79 aa9.65□□□□□ -0.87
SHMT2-212ENST00000554467 LYRM2Q9NU23 88 aaPredicted RBP9.65□□□□□ -0.87
SHMT2-212ENST00000554467 CRYBG3Q68DQ2 2970 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 MYO18BQ8IUG5 2567 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 KIAA1324LA8MWY0 1029 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-212ENST00000554467 SPANXN5Q5MJ07 72 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 OR8G2PQ6IF36 304 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 TCF23Q7RTU1 214 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 PPP1R35Q8TAP8 253 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 IL22RA2Q969J5 263 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 TMEM242Q9NWH2 141 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 CLDN34H7C241 214 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 M0R1X1 148 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 PITX3O75364 302 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 LOXL3P58215 753 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 PMS2P11Q13670 270 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 OR10A7Q8NGE5 316 aa9.64□□□□□ -0.87
SHMT2-212ENST00000554467 TANC2Q9HCD6 1990 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 CLEC18AA5D8T8 446 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 SIAH2O43255 324 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 FCGR3BO75015 233 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 IFNA5P01569 189 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 C17orf58Q2M2W7 97 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 PRAMEF5Q5TYX0 476 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 LYPD2Q6UXB3 125 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 CLEC18CQ8NCF0 446 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 VPS13CQ709C8 3753 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 DUXBA0A1W2PPF3 345 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 FCN3O75636 299 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 TFPI2P48307 235 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 ADORA2A-AS1P86434 159 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 CLEC12BQ2HXU8 276 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 ZCCHC14Q8WYQ9 949 aaKnown RBP9.63□□□□□ -0.87
SHMT2-212ENST00000554467 RNASE6Q93091 150 aaKnown RBP9.63□□□□□ -0.87
SHMT2-212ENST00000554467 VAX2Q9UIW0 290 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 CACNA1BQ00975 2339 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 TNCP24821 2201 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 MALRD1Q5VYJ5 2156 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 CENPEQ02224 2701 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 TCF21O43680 179 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 PRB3Q04118 309 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-212ENST00000554467 EIF4EBP1Q13541 118 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-212ENST00000554467 SCGB1C1Q8TD33 95 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 FAM222BQ8WU58 562 aa9.63□□□□□ -0.87
SHMT2-212ENST00000554467 SYNGR2O43760 224 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 LY6HO94772 140 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 TNFRSF1AP19438 455 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 ARL16Q0P5N6 197 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 ZDHHC16Q969W1 377 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 ZNF665Q9H7R5 613 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 SRD5A3Q9H8P0 318 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 CLN8Q9UBY8 286 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 RNF212BA8MTL3 300 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 B4DEV8 164 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 PFN1P07737 140 aaKnown RBP9.62□□□□□ -0.87
SHMT2-212ENST00000554467 ADH4P08319 380 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 CCL3L1P16619 93 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 CD33P20138 364 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 HTD2P86397 168 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 CATR1Q13166 79 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 ZNF705AQ6ZN79 300 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-212ENST00000554467 ZNF788Q6ZQV5 615 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 OR5T1Q8NG75 326 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 H1FXQ92522 213 aaKnown RBP9.62□□□□□ -0.87
SHMT2-212ENST00000554467 SDSLQ96GA7 329 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 VSIRQ9H7M9 311 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 TRGV10A0A0A0MS01 117 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 A0A1B0GUS0 222 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 TGOLN2O43493 480 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 NUPR1O60356 82 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 CD3EP07766 207 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 IL6RP08887 468 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-212ENST00000554467 COTL1Q14019 142 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 CT45A1Q5HYN5 189 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 CT45A3Q8NHU0 189 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 LSM10Q969L4 123 aaKnown RBP9.62□□□□□ -0.87
SHMT2-212ENST00000554467 IFI27L2Q9H2X8 130 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 NGBQ9NPG2 151 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 PSENENQ9NZ42 101 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 CISD1Q9NZ45 108 aaKnown RBP9.62□□□□□ -0.87
SHMT2-212ENST00000554467 OR6C3Q9NZP0 311 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 GAB2Q9UQC2 676 aa9.62□□□□□ -0.87
SHMT2-212ENST00000554467 LRRC30A6NM36 301 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 ZNF66Q6ZN08 573 aa9.61□□□□□ -0.87
SHMT2-212ENST00000554467 NECAP1Q8NC96 275 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms